PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098570.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HD-ZIP
Protein Properties Length: 848aa    MW: 93155.1 Da    PI: 6.2487
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098570.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox581.6e-182179357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_010098570.1 21 KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 79
                    6789*****************************************************97 PP
2START174.85.4e-551703772204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  ++a  v+e+l+d++ W ++++ +++l vi +g  g+++l+
  XP_010098570.1 170 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPA-KVAEILKDRPSWFRDCRCVDVLSVIPTGngGTIELI 263
                     68999*****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++ ++vi+++S++  +  p+   ss +vRae+lpSg+li+p+++g+s + +v+hvdl++++++++lr+l+
  XP_010098570.1 264 YMQTYAPTTLAAaRDFWTLRYTTSLEDNSLVICERSLTTSTGGPTgppSSCFVRAEMLPSGYLIRPCEGGGSIINIVDHVDLDAWSVPEVLRPLY 358
                     ***************************************9999998999********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++va+l++ +
  XP_010098570.1 359 ESSKILAQKMTVAALRHIR 377
                     ***************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.6941680IPR001356Homeobox domain
SMARTSM003894.4E-151884IPR001356Homeobox domain
CDDcd000862.99E-162181No hitNo description
SuperFamilySSF466892.44E-162183IPR009057Homeodomain-like
PfamPF000464.4E-162179IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.7E-182379IPR009057Homeodomain-like
CDDcd146862.38E-673112No hitNo description
PROSITE profilePS5084826.27160388IPR002913START domain
CDDcd088757.66E-70164380No hitNo description
Gene3DG3DSA:3.30.530.208.8E-23168374IPR023393START-like domain
SMARTSM002343.2E-52169379IPR002913START domain
PfamPF018521.3E-52170377IPR002913START domain
SuperFamilySSF559612.61E-38170381No hitNo description
PfamPF086702.2E-50703847IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009855Biological Processdetermination of bilateral symmetry
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010072Biological Processprimary shoot apical meristem specification
GO:0080060Biological Processintegument development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    Send to blast
MALVIHKDNS NNINKQMDSS KYVRYTPEQV EALERVYSEC PKPSSLRRQQ LIRECPILSN  60
IEPKQIKVWF QNRRCREKQR KEASRLQTVN RKLSAMNKLL MEENDRLQKQ VSHLVYENGY  120
MRQQLHTASG ATTDNSCESV VMSGQNQQQQ NPTPQHPQRD ANNPAGLLAI AEETLAEFLS  180
KATGTAVDWV QMIGMKPGPD SIGIVAVSRN CSGVAARACG LVSLEPAKVA EILKDRPSWF  240
RDCRCVDVLS VIPTGNGGTI ELIYMQTYAP TTLAAARDFW TLRYTTSLED NSLVICERSL  300
TTSTGGPTGP PSSCFVRAEM LPSGYLIRPC EGGGSIINIV DHVDLDAWSV PEVLRPLYES  360
SKILAQKMTV AALRHIRQIA QETSGEIQYG GGRQPAVLRT FSQRLCRGFN DAVNGFVDDG  420
WSLLGSDGAE DVTIVINSSS NKFLGSQYNA SMFPTFGGVL CAKASMLLQN VPPALLVRFL  480
REHRSEWADY GVDAYSASCL KASPYAIPCA RPGGFPSSQV ILPLAHTVEH EEFLEVVRLE  540
GHAFSPEEVA LARDMYLLQL CSGVDESAVG ACAQLVFAPI DESFADEAPL LPSGFRVIPL  600
DPKADTPAAT RTLDLASTLE VGSGGARPSS EADTNSYNLR SVLTIAFQFT FENHTRDNVA  660
AMARQYVRSV VGSVQRVAMA IAPSRLGSQL GPKPLPQSPE ALTLAQWICR SYRIHTGGEI  720
FQVESQSGDA VLKRLWHHSD AIMCCTVKTN ASPVFTFSNQ AGLDMLETTL VALQDIMLDK  780
IFDEAGRKTL CSEFSKIMQQ GFAYLPAGIC VSSMGRPVSY EQAVAWKVLN DDDSNHCLAF  840
MFMNWSFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098570.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098570.10.0homeobox-leucine zipper protein ATHB-14
SwissprotA2XK300.0HOX32_ORYSI; Homeobox-leucine zipper protein HOX32
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLW9RI950.0W9RI95_9ROSA; Homeobox-leucine zipper protein HOX32
STRINGXP_010098570.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51763353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Li YY, et al.
    Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
    Rice (N Y), 2016. 9(1): p. 46
    [PMID:27624698]