PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098085.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CPP
Protein Properties Length: 430aa    MW: 48569.6 Da    PI: 8.2939
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098085.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR44.43.4e-1482120241
             TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                     + k+C Ck++kClk+YCeCfa+g +C+  CkC dC+N+ e
  XP_010098085.1  82 HYKQCGCKQTKCLKLYCECFASGIYCNG-CKCVDCHNNIE 120
                     779*************************.********976 PP
2TCR42.81e-13159198140
             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                     ++k++C+Ckk+ Clk+YCeCf+a+  Cse+CkC dCkN e
  XP_010098085.1 159 QHKRRCQCKKTCCLKRYCECFQANMLCSESCKCLDCKNYE 198
                     5899**********************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.1E-1481121IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163432.71982199IPR005172CRC domain
PfamPF036383.2E-1184118IPR005172CRC domain
SMARTSM011144.6E-14159200IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.1E-9162197IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MRRRRGTYGV SRFRAKKLDF SVFQGFSLAT ASSLPNRFQS LAEPNLELHL SPSTPFSTDR  60
EKDSSTSQPQ ECAKGDNCTL EHYKQCGCKQ TKCLKLYCEC FASGIYCNGC KCVDCHNNIE  120
NESERRATVK NILERNPNAF KPKLTNNSPI TKESPLAAQH KRRCQCKKTC CLKRYCECFQ  180
ANMLCSESCK CLDCKNYEGS EEKLALSPVV QLYTETGVRE ANIAAFAAIL PFGSNKKNTL  240
TQVNPLITSG SPSALSFAPR RYRSVFADVI SPESIRHFCS NLVAVSNKQA LKENHRVTVC  300
RLEDKENFPY LPDVEELILD DHLNQNGVNA EFLKSTHVNG MNGMLLSPGV DALCDEKVNM  360
LGHLEHNANV YMEQERLVLI NFQDFLKKII TCRNVKGDIL IWSELEWLLL PNKSHVSHIK  420
SLSYQILNKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A5e-248420612130Protein lin-54 homolog
5fd3_B5e-248420612130Protein lin-54 homolog
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098085.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098085.20.0protein tesmin/TSO1-like CXC 6 isoform X1
TrEMBLW9R6I20.0W9R6I2_9ROSA; Uncharacterized protein
STRINGXP_010098085.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26263379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20110.18e-68Tesmin/TSO1-like CXC domain-containing protein