PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097712.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 447aa    MW: 50407.9 Da    PI: 6.1503
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097712.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.7e-13247293354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h + Er RRd++++ + +Lr l+P++     +K++ a+++  A+eYIk+L
  XP_010097712.1 247 TKHFASERHRRDQMRDTYTTLRNLVPNP-----TKNDRASVVGDAIEYIKEL 293
                     68**************************.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.71E-15242306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.856244293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.59E-10245297No hitNo description
Gene3DG3DSA:4.10.280.107.1E-13247311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-10247293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-10250299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MYVEDNCGFD PNNIPDAAAP EDGFHPQMSG FPGADGNLKH PTEEFSYHHH HHHQEDAAAA  60
ASAALDIEFQ QQQQQLAFNM ESSTNIDINT ATGQLVSFDH HHPNWHHQHQ HHQQQQLLHE  120
QPDLLNLFHF PRCSPSSSSS LLPASTITFA NSPSSCSSVL YDPLLHLNLP PQPPLFKELF  180
QSLPNGYNTF PSASRNNNGS LFSTSGDIER EGSAGIYGPE GLQFENGVLE FARDGAQIER  240
GRDGRVTKHF ASERHRRDQM RDTYTTLRNL VPNPTKNDRA SVVGDAIEYI KELRRTVNEL  300
KILVEKKRRS RESIKRQKTE EDIGGDVGDV ENCHIKMDPD QSYTRSSWLQ RKSKDTEVDV  360
RIIEDEVTVK LIQRKKINLL LIASRVLDEL QLDLRHVAGG HVGDTYSFLF NTKIYEGSSL  420
YASAIADKLI DVLDRQYAAI LPPTSSY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097712.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097712.10.0transcription factor bHLH91
TrEMBLW9R5530.0W9R553_9ROSA; Uncharacterized protein
STRINGXP_010097712.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-64bHLH family protein