PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097560.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 305aa    MW: 34396.7 Da    PI: 6.8707
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097560.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-05184228655
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR++i ++ +eL +l+P  +      K+  ae+ + A +Y+k Lq
  XP_010097560.1 184 SIAARERRRKITEKTQELGKLIPGgN------KMKTAEMFQAAYKYVKFLQ 228
                     67889******************955......9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.19E-10178239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.763178227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-9181234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.0E-7184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MTSIFYLHGS KLCYNLGSSS LQSLISPESY INFPQTQTEL DSSFFFDFDD DNNLSLSNTS  60
IDSLFDTNVK DCSTAFLPNF YSTAEHSLVS LSPKKPYVNS QDEEARHPKR QKITTSENHC  120
RFTYASELSN AAFVPNPSWR DVNIFPSSQA LVFNACGNQE MKSDMKRGNS SSGSTSTTAV  180
SAQSIAARER RRKITEKTQE LGKLIPGGNK MKTAEMFQAA YKYVKFLQAQ LAVLLLIRSI  240
REQREQSLVH IKELQVLASP IIQEKLYSDE KCLVPKEFVQ ALANNHEIQS KSFFEDIEHL  300
LQING
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097560.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097560.10.0transcription factor bHLH52
TrEMBLW9RFG90.0W9RFG9_9ROSA; Uncharacterized protein
STRINGXP_010097560.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-24bHLH family protein