PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010097031.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 426aa MW: 46954.8 Da PI: 8.1631

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010097031.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00032	328	365	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ ++++ L +l+ + +K + a++L++A+ YI+ L XP_010097031.1 328 RKEKLGDRIAALHRLVAPF-----GKTDTASVLTEAIGYIQFL 365 6678889999999999998.....8****************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	2.2E-8	313	376	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	11.827	316	365	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.81E-5	326	370	No hit	No description
SuperFamily	SSF47459	1.03E-10	326	377	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence Send to blast
MEYANLHTQH HHHQLQEQVN IGAPSASLPI IAPSTLVTTT TSNCNWNPSL ILNNGIDVYP 60 TEANIPNSKL WQYNSPITTS TFTSHEFNYG DHHARAFSAQ RSSTASTEES PLSNIKEEPN 120 SDSFSKLKIA KAIYNNSTFM ELMSTNSSYN SAPNELYSSI AQNSSINRNA SFGHVFPCTN 180 TNSTSSTAAR STTTGSLFPI SLVLSSGGFM NKNSQASDLL SHTAYSRDRS QCYSPSSQHS 240 NNSNIGCGLY RDQPLSVQGH GHHDPDNMQE SRSSPSNSSN NNMTSAFFNE VTRTKRQSSF 300 SEPKESHAEA NKKSKSILRS SNPPLKVRKE KLGDRIAALH RLVAPFGKTD TASVLTEAIG 360 YIQFLHDQVQ TLSMPYMKSL QSKTSRKIQQ VYGLSNEEET ELKMDLRSRG LCLVPQSCAS 420 YLNGFD

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence Send to blast

MEYANLHTQH HHHQLQEQVN IGAPSASLPI IAPSTLVTTT TSNCNWNPSL ILNNGIDVYP  60
TEANIPNSKL WQYNSPITTS TFTSHEFNYG DHHARAFSAQ RSSTASTEES PLSNIKEEPN  120
SDSFSKLKIA KAIYNNSTFM ELMSTNSSYN SAPNELYSSI AQNSSINRNA SFGHVFPCTN  180
TNSTSSTAAR STTTGSLFPI SLVLSSGGFM NKNSQASDLL SHTAYSRDRS QCYSPSSQHS  240
NNSNIGCGLY RDQPLSVQGH GHHDPDNMQE SRSSPSNSSN NNMTSAFFNE VTRTKRQSSF  300
SEPKESHAEA NKKSKSILRS SNPPLKVRKE KLGDRIAALH RLVAPFGKTD TASVLTEAIG  360
YIQFLHDQVQ TLSMPYMKSL QSKTSRKIQQ VYGLSNEEET ELKMDLRSRG LCLVPQSCAS  420
YLNGFD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010097031.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010097031.1	0.0	transcription factor bHLH110
TrEMBL	W9RRV8	0.0	W9RRV8_9ROSA; Uncharacterized protein
STRING	XP_010097031.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4045	32	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	1e-37	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21387157