PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094760.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CO-like
Protein Properties Length: 444aa    MW: 49806.2 Da    PI: 5.8197
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094760.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box29.51.6e-091659340
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                    +r C+ + +k++++fC  ++ +lC+ C ++ H+       H++v
  XP_010094760.1 16 ARACDSCLRKRARWFCAADDAFLCQACDTSVHSAnqlasrHERV 59
                    578*****************************667888888876 PP
2CCT66.86e-23378420143
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 
                     Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+
  XP_010094760.1 378 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 420
                     9****************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011911.0921461IPR000315B-box-type zinc finger
SMARTSM003361.4E-111461IPR000315B-box-type zinc finger
PfamPF006432.9E-81659IPR000315B-box-type zinc finger
CDDcd000212.54E-91761No hitNo description
PfamPF062036.0E-18378420IPR010402CCT domain
PROSITE profilePS5101716.083378420IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MITDKKTANA MAGKTARACD SCLRKRARWF CAADDAFLCQ ACDTSVHSAN QLASRHERVR  60
LQTSSHKGNY NHSHHDLHDD ECSPAWHRGF TRKARTPRHN NKPAAQQAKY DDVEKVLSAA  120
NHRHDPLPFV PEMSNEEESP ITDENEEEQL LYRVPVFDPF AAELCNSING DDDERAGMTT  180
TEKGKELGQQ DYGKSVISTS TAHEAEFDHE IHGFLPSELE LAEFAADVES LLGGGLEDHD  240
QSCQDINGLE LELLGCKEED DFDIDIDVDV CINPSEQRVK VKEEKETCVF HETANSPMVQ  300
TKKRDIILRL NYEAVIAAWA SQGSPWTTGN RPDFNPDDGW PDCLDVCHTD HVGPANGDSS  360
RGGLGLGGVG GSVGDGGREA RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR  420
TFFMSTVNNS TNSTSFPYQL MMSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1388404RRTRLFSKKIRYEVRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010094760.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF9282214e-37KF928221.1 Boehmeria nivea COL domain class transcription factor (COL03) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010094760.10.0zinc finger protein CONSTANS-LIKE 16
TrEMBLW9R7M10.0W9R7M1_9ROSA; Zinc finger protein CONSTANS-LIKE 16
STRINGXP_010094760.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14733392
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25440.11e-79B-box type zinc finger protein with CCT domain