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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_010094683.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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| Family |
GRAS |
| Protein Properties |
Length: 597aa MW: 67034.4 Da PI: 6.9597 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010094683.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 426.4 | 2.4e-130 | 225 | 597 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l+++L++cA avs+++l++a +l+ + +++s +g+p+qRl ay++e+L+a+l +s++++ykal+++e + sse +++++++++++P+ +f++
XP_010094683.1 225 LKQVLMACAYAVSESNLSKAVELMDIMGDMVSVSGEPIQRLGAYMLEGLRAKLEKSGTSIYKALKCNEPT---SSELMSFMSILFQICPYWRFAY 316
5799*****************************************************************9...99999***************** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
aN I eav++e+r+HiiDf+i qG+QW++L++ La p+gpp +R+Tgv++++s+ + l+ +g+rLak Ae+l+vpfef+ +a ++
XP_010094683.1 317 ASANAVIKEAVQNEHRIHIIDFQIAQGTQWMSLMEDLARLPGGPPFIRVTGVDDSQSFhaRGGGLNLVGQRLAKHAESLNVPFEFHG-AAMCSSE 410
******************************************************9999889999***********************.8999999 PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+ le+Lr++pgEa++Vn+ + lh+++desvs+e++rd++L+lvkslsPkv+++veqe+++n+++F +rf+e+++yy+a+f+s+++ pr++++ri
XP_010094683.1 411 VVLETLRIRPGEAIVVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFYTRFVETMDYYTAMFESIDVACPRNDKQRI 505
99********************************************************************************************* PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ E+++++r+ivn++aceg er+erhe ++kWr+rl++aGF+p pls++++ +k +lr++k ++ yrv e++g+l+lgWk+r++ + SaWr
XP_010094683.1 506 SAEQHCVARDIVNMIACEGPERVERHELFGKWRSRLMMAGFTPCPLSSSVTVAVKNMLREYKyNQNYRVVEKDGALYLGWKNRAMSTSSAWR 597
**************************************************************9999*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 597 aa
Download sequence Send
to blast |
MSNIEATHKH FDFKEECCTH HSVLKNKKAN KNPKVIFVIL KCIAKVLRMQ TSQKHQATGG 60
IHGLYQQHVQ DINPYYSPHF QILENNMFPD TGSQGKSLSF ETCNEQYFTL DSSPATADFL 120
TCDSHSPSAV SVLSHRSPFS PQGSHSCSSD PHHSSEIYSG SPISGCSVTD DGNELKHKLR 180
ELEISLLGIE SDIVDSCYCS YKTEAHQATS LASWKMMDTL PKLDLKQVLM ACAYAVSESN 240
LSKAVELMDI MGDMVSVSGE PIQRLGAYML EGLRAKLEKS GTSIYKALKC NEPTSSELMS 300
FMSILFQICP YWRFAYASAN AVIKEAVQNE HRIHIIDFQI AQGTQWMSLM EDLARLPGGP 360
PFIRVTGVDD SQSFHARGGG LNLVGQRLAK HAESLNVPFE FHGAAMCSSE VVLETLRIRP 420
GEAIVVNFPY VLHHMPDESV STENHRDRLL RLVKSLSPKV MTLVEQESNT NTSPFYTRFV 480
ETMDYYTAMF ESIDVACPRN DKQRISAEQH CVARDIVNMI ACEGPERVER HELFGKWRSR 540
LMMAGFTPCP LSSSVTVAVK NMLREYKYNQ NYRVVEKDGA LYLGWKNRAM STSSAWR
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
