PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093696.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 306aa    MW: 34206.6 Da    PI: 9.9244
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093696.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.88.4e-32234292360
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                     D y+WrKYGqK++kgs++prsYY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh+k
  XP_010093696.1 234 DDYSWRKYGQKPIKGSPYPRSYYKCSSVkGCPARKHVERCLDDPTMLVVTYEGDHNHSK 292
                     99************************988****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105333.2E-14184230IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.805.5E-34219292IPR003657WRKY domain
PROSITE profilePS5081130.481227293IPR003657WRKY domain
SuperFamilySSF1182901.96E-27229291IPR003657WRKY domain
SMARTSM007741.8E-37232292IPR003657WRKY domain
PfamPF031065.4E-27234290IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MEKTPGLLCL SWDSRIHEVA QSGLTQAHEF LSCVKQEKSL QEVSLVAQEA IGEFRKLLIL  60
LDRSNPSSDQ KRIRKGPLPK THDVNHVEFM DISRGSSQPF VIRQFFPPSY SSHTISTVVV  120
PNNNNNNNSV MGLSQFSQQP TTSNSLISMH GRSSTNTRVI HYPSSSEHLA SEVSNSSMFS  180
SNSRSCGAAK SEDTGTRCVA STGGCHCSKR RKLRIRRRIR VPSVSNKSAD IPPDDYSWRK  240
YGQKPIKGSP YPRSYYKCSS VKGCPARKHV ERCLDDPTML VVTYEGDHNH SKITFQPPTL  300
MIQAQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-212302901574Probable WRKY transcription factor 4
2lex_A3e-212302901574Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213219RIRRRIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093696.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093696.10.0probable WRKY transcription factor 7
TrEMBLW9QU590.0W9QU59_9ROSA; Protein WRKY1
STRINGXP_010093696.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144241318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-45WRKY DNA-binding protein 21