PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010093488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | BES1 | ||||||||
Protein Properties | Length: 391aa MW: 42370.5 Da PI: 7.2144 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 160.1 | 1.5e-49 | 2 | 77 | 1 | 76 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 ++++r ptwkErEnnk+RERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrk s ++ XP_010093488.1 2 TSGTRLPTWKERENNKKRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKISVQM 77 5899******************************************************************987766 PP | |||||||
2 | DUF822 | 35.2 | 4.3e-11 | 139 | 212 | 71 | 150 |
DUF822 71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 +g+kp e +e+ag sa asp+ss++ +sp++sy++sp sssfpsp+s++ + + + +sl+p+l++ls++sss+ XP_010093488.1 139 QGCKPAECMEVAGGSAAASPCSSYH--------PSPCASYNPSPGSSSFPSPASSSYVANPNGdgSSLIPWLKNLSSASSSA 212 89***********************........*******************9999887765577**********9987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 5.2E-61 | 3 | 206 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence Send to blast |
MTSGTRLPTW KERENNKKRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKISVQMIFS KCMFSVAFTR ERKHTRFSSL LLFLVSEPCN HVDLEETKIP 120 FLEQPIGFWD FENSEGCIQG CKPAECMEVA GGSAAASPCS SYHPSPCASY NPSPGSSSFP 180 SPASSSYVAN PNGDGSSLIP WLKNLSSASS SASSSKLPHL YIHSGSISAP VTPPLSSPTA 240 RTPRIKTDWD ENSTRPLWGG QHCSFLPSST PPSPGRQVVD PEWFAGIRLP QTGPTSPTFS 300 LVSANPFGFK DEVMAGGGSR MWTPGQSGTC SPAIAAGSDH TADIPMAEVI SDEFAFGSHA 360 TGLVKPWEGE RIHEECGSDD LELTLGSSRT R |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-18 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-18 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-18 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-18 | 6 | 72 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010093488.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024019453.1 | 1e-161 | BES1/BZR1 homolog protein 4 | ||||
Refseq | XP_024019454.1 | 1e-161 | BES1/BZR1 homolog protein 4 | ||||
Swissprot | Q9ZV88 | 1e-99 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | W9QTN8 | 0.0 | W9QTN8_9ROSA; Uncharacterized protein | ||||
STRING | XP_010093488.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2661 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 2e-79 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Entrez Gene | 21400544 |