PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010092418.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CPP
Protein Properties Length: 786aa    MW: 85251.2 Da    PI: 6.8565
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010092418.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR49.96.3e-16491528340
             TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                     +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk 
  XP_010092418.1 491 CKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 528
                     89**********************************96 PP
2TCR50.25.2e-16575613139
             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                     ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN 
  XP_010092418.1 575 RHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNA 613
                     589***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011144.0E-17489530IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163436.911490615IPR005172CRC domain
PfamPF036381.5E-11492527IPR005172CRC domain
SMARTSM011141.1E-16575616IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.9E-11577613IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 786 aa     Download sequence    Send to blast
MDTPERNKIG TPASKFEDSP VFNYINSLSP IKPVKSLHVT QTFSSLSFAS LPSVFTSPHV  60
SSHKESRFIR RHSSSDPLKP EISSENGNAA CTSEGVGVDP AQLYNNSAEQ HENCDSGVDI  120
GAVSVDPHNE GSKFVIELPH TLKYDCGSPD DCVSTPCGVE ADFALKLVDP SASLDPHVQE  180
VREKGSSDGE TQYHEMCLSE RKIDGAVCDW ESLISDTADI LIFNSPNGSE AFKGLIQNSL  240
EPVTRYCSSL AVELSGINNE HHMQIVDPVS SEQQNGEVPS SEIRDCSRLK DIGQTCMASD  300
PGETKDNEAE TYVAFSCKSV FSLHRGMRRR CLDFEMAGAR RKNLGDGSSS SSGLSQPDEK  360
ITTNEKQLGP LRPCGDSSRH VLPGIGLHLN ALTTTSKGNK VRKSDNLSSG IHIRLPNYAA  420
SIHSPRAGQE ALDKSETPAS SIIDTNAAEN GVQLLQDASQ APGSLASEDF NQNSPKKKRR  480
KLENAGETEG CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQECFNKPIH EDTVLATRKQ  540
IESRNPLAFA PKVIRGSDSV PEFGDESSKT PASARHKRGC NCKKSNCLKK YCECYQGGVG  600
CSISCRCEGC KNAYGRKDGS SALIGTETEQ DEEETEACEK SLVDKPSQKI DIHNNEEQNP  660
GSAHPMTPLR MSRSLVPLPF SSKGKPPRSS FLTVASSSSG LYSQKHGKPG ILRSQPKEKH  720
MPTIPDDEMP EILRGDGSPT TGIKTASPNS KRISPPHCHF GSPSRRSGRK LILQSIPSFP  780
SLTPQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A7e-1849461214120Protein lin-54 homolog
5fd3_B7e-1849461214120Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1474481PKKKRRKL
2475479KKKRR
3475480KKKRRK
4476480KKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00624PBMTransfer from PK22848.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010092418.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092418.10.0protein tesmin/TSO1-like CXC 2 isoform X1
TrEMBLW9RCX70.0W9RCX7_9ROSA; Uncharacterized protein
STRINGXP_010092418.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26193375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-170TESMIN/TSO1-like CXC 2