PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010090859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 381aa MW: 42832.8 Da PI: 4.5648 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162 | 2.2e-50 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l pGfrFhPtd elv++yLk+k+ g+kl++ e+i+evdiyk+ PwdLp k ++++++ +wyfF++r+kkya+g r +rat+ gyWk+tgkd++v XP_010090859.1 6 LSPGFRFHPTDVELVKYYLKRKILGRKLHF-EAISEVDIYKYAPWDLPdKaCLDSKDLKWYFFCPREKKYASGARMKRATEFGYWKTTGKDRPVN 99 579*************************99.89**************96346777778************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ge+vg+ ktLvf++grapkg +tdWvmhey l XP_010090859.1 100 Y-NGEVVGMIKTLVFHTGRAPKGDRTDWVMHEYML 133 9.999****************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.89E-58 | 4 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.03 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.8E-26 | 8 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MGKTLLSPGF RFHPTDVELV KYYLKRKILG RKLHFEAISE VDIYKYAPWD LPDKACLDSK 60 DLKWYFFCPR EKKYASGARM KRATEFGYWK TTGKDRPVNY NGEVVGMIKT LVFHTGRAPK 120 GDRTDWVMHE YMLQEKNLAD RGVVQDSYVL CMVFKKEGPG PRNGAQYGAP FREEDWTDHE 180 EDNCAEVGPS AIVTFQNNLL PNRNLVACNS HTLESTGNVF SPESCVSDMV PPSSEVTLPV 240 SANDDPVERV ESFDDDDILE MLGYFIEGEP FEVNGNNQNK DANNVNHVDP ATVAAPHDGT 300 DIFKDLADLD NLAYGFHFSN AHITPSFDEA FPTGDDRSFL ELVDLDAPLS RPAGASEDDI 360 NTFPAVQLSM WPHTAHNLDG F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-45 | 6 | 157 | 15 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010090859.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010090859.1 | 0.0 | NAC domain-containing protein 82 | ||||
Refseq | XP_024017752.1 | 0.0 | NAC domain-containing protein 82 | ||||
Swissprot | Q9FY82 | 1e-100 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | W9QLV4 | 0.0 | W9QLV4_9ROSA; NAC domain-containing protein 78 | ||||
STRING | XP_010090859.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3302 | 34 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 1e-102 | NAC domain containing protein 82 |
Link Out ? help Back to Top | |
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Entrez Gene | 21403605 |
Publications ? help Back to Top | |||
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