PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010090025.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

HRT-like

Protein Properties

Length: 525aa MW: 58858.4 Da PI: 10.085

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010090025.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	50.5	3.4e-16	320	350	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+ l+ s+C+r+Pv+gRKRC+eHKGmRi XP_010090025.1 320 ICGMVLGLDSICRRPPVEGRKRCAEHKGMRI 350 8*****************************7 PP
2	HRT-like	52.4	9.1e-17	397	427	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il dGs+C qP kg+KRC eHKG++i XP_010090025.1 397 ICGFILADGSPCISQPLKGNKRCLEHKGRKI 427 8***************************997 PP
3	HRT-like	53	5.8e-17	478	508	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l+dG vC+r+Pv gR RCeeHKG R+ XP_010090025.1 478 ICGVVLGDGLVCTRKPVVGRVRCEEHKGIRV 508 8***************************997 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:2000033	Biological Process	regulation of seed dormancy process
GO:0097100	Molecular Function	supercoiled DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence Send to blast
MRERERERST DFWLLTPASQ FRQFTSSYEG KRTKGVFKVR VTVIFLGRSR DIVAGDPVAV 60 MSRLKREDCK RTKHDREFSK WEILIGPSDW EEYLLGKEGA ERYRVHNLPK NSGPGVYELG 120 IAVSRTGLGR EIGKLDPERI VVVYLGQADN VRTRLQHYGR TGAHLGNSCP PQCKTVIPQK 180 GPGLFEEILS RGYPIIFRWA PMQSKSDALK TETELLNTFD YAWNTSINGT RRPDDILNKL 240 KKISSSNIHF SDIARKLVPF SQKQVGIRIK ARKFPSAEEK IDTSADEESQ NIFSRVFKFG 300 RSQPKLVLDR SVIVLEDTTI CGMVLGLDSI CRRPPVEGRK RCAEHKGMRI KGPVSVALSN 360 SNVNSQSTFS APSSSLHSEE LQPVTFNNAS RESFTPICGF ILADGSPCIS QPLKGNKRCL 420 EHKGRKILQQ TNSASVTKEK LYYLPDPVSE SKSSEICFSG EVQAQAFAKR LNANCDTICG 480 VVLGDGLVCT RKPVVGRVRC EEHKGIRVTR FATTKFAAEK QIQVV

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence Send to blast

MRERERERST DFWLLTPASQ FRQFTSSYEG KRTKGVFKVR VTVIFLGRSR DIVAGDPVAV  60
MSRLKREDCK RTKHDREFSK WEILIGPSDW EEYLLGKEGA ERYRVHNLPK NSGPGVYELG  120
IAVSRTGLGR EIGKLDPERI VVVYLGQADN VRTRLQHYGR TGAHLGNSCP PQCKTVIPQK  180
GPGLFEEILS RGYPIIFRWA PMQSKSDALK TETELLNTFD YAWNTSINGT RRPDDILNKL  240
KKISSSNIHF SDIARKLVPF SQKQVGIRIK ARKFPSAEEK IDTSADEESQ NIFSRVFKFG  300
RSQPKLVLDR SVIVLEDTTI CGMVLGLDSI CRRPPVEGRK RCAEHKGMRI KGPVSVALSN  360
SNVNSQSTFS APSSSLHSEE LQPVTFNNAS RESFTPICGF ILADGSPCIS QPLKGNKRCL  420
EHKGRKILQQ TNSASVTKEK LYYLPDPVSE SKSSEICFSG EVQAQAFAKR LNANCDTICG  480
VVLGDGLVCT RKPVVGRVRC EEHKGIRVTR FATTKFAAEK QIQVV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010090025.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024017156.1	0.0	protein EFFECTOR OF TRANSCRIPTION 2 isoform X1
TrEMBL	W9R5X1	0.0	W9R5X1_9ROSA; Uncharacterized protein
STRING	XP_010090025.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9409	31	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-102	effector of transcription2

Link Out ? help Back to Top
Entrez Gene	21409878