PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010089971.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

GATA

Protein Properties

Length: 820aa MW: 93043 Da PI: 9.6196

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010089971.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	56.1	5.2e-18	727	760	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C+ t+Tp+WR+gp g+ktLCnaCG+++r+ + XP_010089971.1 727 CTHCQMTTTPQWREGPMGPKTLCNACGVRFRSGR 760 *******************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF52540	4.93E-6	56	168	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Gene3D	G3DSA:3.40.50.300	1.1E-4	86	146	IPR027417	P-loop containing nucleoside triphosphate hydrolase
SuperFamily	SSF57716	7.13E-14	721	783	No hit	No description
PROSITE profile	PS50114	11.82	721	757	IPR000679	Zinc finger, GATA-type
SMART	SM00401	3.9E-17	721	771	IPR000679	Zinc finger, GATA-type
Gene3D	G3DSA:3.30.50.10	5.1E-14	726	758	IPR013088	Zinc finger, NHR/GATA-type
CDD	cd00202	6.05E-15	726	773	No hit	No description
PROSITE pattern	PS00344	0	727	752	IPR000679	Zinc finger, GATA-type
Pfam	PF00320	9.6E-16	727	760	IPR000679	Zinc finger, GATA-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009733	Biological Process	response to auxin
GO:0010082	Biological Process	regulation of root meristem growth
GO:0010366	Biological Process	negative regulation of ethylene biosynthetic process
GO:0019827	Biological Process	stem cell population maintenance
GO:0045087	Biological Process	innate immune response
GO:0055070	Biological Process	copper ion homeostasis
GO:0005768	Cellular Component	endosome
GO:0005802	Cellular Component	trans-Golgi network
GO:0016021	Cellular Component	integral component of membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0008476	Molecular Function	protein-tyrosine sulfotransferase activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 820 aa Download sequence Send to blast
MDPAKKFSLL LLFLGFVSVW VNASTFSDDY GHCERIVQKW AFSSLEEEAK EDKHTLRDLL 60 FFLHVPRTGG RTYFHCFLRK LYPNSLECPR SYDKLRFDPR KQKCRLLVTH DDYSMMSKLP 120 KQRTSVVTIL RDPVDRVFST YEFSVEVAAR FLVHPNLTSA TQMAARLRAK TTGVSTLDIW 180 PWKYLVPWMR EDLFARRDAR KHRGLNEIMS NDPYDMLEMV MPLQEYIEDP IAHEIIHNGA 240 TFQVAGLTNN SYTPESHEVR QCVQKHTVLG DLVLQVAKKR LDDMLYVGLT EEHRESATMF 300 ANVVGSQVIS QLRTSSSSTE STADNKSARS ASISDSRPNN NHHQKSTSDQ NTTDIASPEN 360 DEALKENMTV GDLMDAYEVC ISSLRKAQTQ RRTSSLNRIS PVNFTKEARH HVSKAVLEQI 420 RSLNHLDLEL YKYAQDIFAK QHKRSMHNFV GIEKLESMFN NSYRRTFWNF LSIGMTLVSL 480 LIFFVFVNAR RRMLKVKTVL IDMVGSLDFD GVSTDLLNIF DFPLEDVEVG AEKDDWNDIQ 540 LLDLPSDISM GLSSVFCSGL QKDSSKEIKN ISFSYDRTCR LNRSPSAAET TSSGGIVLSD 600 DSSSDIKHIH LFKTSSPVSI LESNSSCFAE NPRTADQKSS VVPVKRPRSK KRSRPSNFDR 660 LYTLPFIAAL ERLRPSAASE SDLGAPQVGK MFKTAKKAMK KKRATPHPIG IEVRNVSSQQ 720 SGEIKKCTHC QMTTTPQWRE GPMGPKTLCN ACGVRFRSGR LFPEYRPAAS PTFVPSLHSN 780 SHKKVIEMRN KASQRANTSR AGVELYLRPQ AGNSVRQLIV

Sequence ? help Back to Top

Protein Sequence Length: 820 aa Download sequence Send to blast

MDPAKKFSLL LLFLGFVSVW VNASTFSDDY GHCERIVQKW AFSSLEEEAK EDKHTLRDLL  60
FFLHVPRTGG RTYFHCFLRK LYPNSLECPR SYDKLRFDPR KQKCRLLVTH DDYSMMSKLP  120
KQRTSVVTIL RDPVDRVFST YEFSVEVAAR FLVHPNLTSA TQMAARLRAK TTGVSTLDIW  180
PWKYLVPWMR EDLFARRDAR KHRGLNEIMS NDPYDMLEMV MPLQEYIEDP IAHEIIHNGA  240
TFQVAGLTNN SYTPESHEVR QCVQKHTVLG DLVLQVAKKR LDDMLYVGLT EEHRESATMF  300
ANVVGSQVIS QLRTSSSSTE STADNKSARS ASISDSRPNN NHHQKSTSDQ NTTDIASPEN  360
DEALKENMTV GDLMDAYEVC ISSLRKAQTQ RRTSSLNRIS PVNFTKEARH HVSKAVLEQI  420
RSLNHLDLEL YKYAQDIFAK QHKRSMHNFV GIEKLESMFN NSYRRTFWNF LSIGMTLVSL  480
LIFFVFVNAR RRMLKVKTVL IDMVGSLDFD GVSTDLLNIF DFPLEDVEVG AEKDDWNDIQ  540
LLDLPSDISM GLSSVFCSGL QKDSSKEIKN ISFSYDRTCR LNRSPSAAET TSSGGIVLSD  600
DSSSDIKHIH LFKTSSPVSI LESNSSCFAE NPRTADQKSS VVPVKRPRSK KRSRPSNFDR  660
LYTLPFIAAL ERLRPSAASE SDLGAPQVGK MFKTAKKAMK KKRATPHPIG IEVRNVSSQQ  720
SGEIKKCTHC QMTTTPQWRE GPMGPKTLCN ACGVRFRSGR LFPEYRPAAS PTFVPSLHSN  780
SHKKVIEMRN KASQRANTSR AGVELYLRPQ AGNSVRQLIV

Functional Description ? help Back to Top
Source	Description
UniProt	Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides. {ECO:0000269\|PubMed:19666544}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010089971.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024017107.1	0.0	protein-tyrosine sulfotransferase isoform X1
Swissprot	Q3EDG5	0.0	TPST_ARATH; Protein-tyrosine sulfotransferase
TrEMBL	W9QRZ0	0.0	W9QRZ0_9ROSA; Protein-tyrosine sulfotransferase
STRING	XP_010089971.1	0.0	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08010.2	6e-40	GATA transcription factor 11

Link Out ? help Back to Top
Entrez Gene	21391434

Publications ? help Back to Top
Komori R,Amano Y,Ogawa-Ohnishi M,Matsubayashi Y Identification of tyrosylprotein sulfotransferase in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 2009. 106(35): p. 15067-72 [PMID:19666544] Moore KL Protein tyrosine sulfation: a critical posttranslation modification in plants and animals. Proc. Natl. Acad. Sci. U.S.A., 2009. 106(35): p. 14741-2 [PMID:19717448] Stührwohldt N,Dahlke RI,Steffens B,Johnson A,Sauter M Phytosulfokine-α controls hypocotyl length and cell expansion in Arabidopsis thaliana through phytosulfokine receptor 1. PLoS ONE, 2011. 6(6): p. e21054 [PMID:21698171] Igarashi D,Tsuda K,Katagiri F The peptide growth factor, phytosulfokine, attenuates pattern-triggered immunity. Plant J., 2012. 71(2): p. 194-204 [PMID:22353039] Mosher S, et al. The tyrosine-sulfated peptide receptors PSKR1 and PSY1R modify the immunity of Arabidopsis to biotrophic and necrotrophic pathogens in an antagonistic manner. Plant J., 2013. 73(3): p. 469-82 [PMID:23062058] Kang J, et al. Suppression of Photosynthetic Gene Expression in Roots Is Required for Sustained Root Growth under Phosphate Deficiency. Plant Physiol., 2014. 165(3): p. 1156-1170 [PMID:24868033] Stührwohldt N, et al. Phytosulfokine peptide signaling controls pollen tube growth and funicular pollen tube guidance in Arabidopsis thaliana. Physiol Plant, 2015. 153(4): p. 643-53 [PMID:25174442] Wu T, et al. An Arabidopsis thaliana copper-sensitive mutant suggests a role of phytosulfokine in ethylene production. J. Exp. Bot., 2015. 66(13): p. 3657-67 [PMID:25908239] Shinohara H,Mori A,Yasue N,Sumida K,Matsubayashi Y Identification of three LRR-RKs involved in perception of root meristem growth factor in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(14): p. 3897-902 [PMID:27001831]