PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010089599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | B3 | ||||||||
Protein Properties | Length: 121aa MW: 14519.8 Da PI: 9.1134 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.3 | 9.8e-12 | 14 | 97 | 13 | 87 |
TT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 13 sgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87 ++rl++pk+ e + +++ + +++l d g We+++ +r+k++ ++ ++GW +Fv+ +gL++gD+v+++ +++ XP_010089599.1 14 RSRLSVPKEWWEIIrplfgeELDRRHEIELWAVDGVGMFWEFRCAVRQKGRYkkpVLQSEGWLKFVNYKGLRAGDVVILETVEN 97 46799****996669999998888899999999999********8744444456566779********************7654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 4.71E-13 | 6 | 98 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.4E-13 | 6 | 98 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.18E-10 | 8 | 110 | No hit | No description |
Pfam | PF02362 | 4.9E-9 | 15 | 97 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MAGLPKWMTE CDVRSRLSVP KEWWEIIRPL FGEELDRRHE IELWAVDGVG MFWEFRCAVR 60 QKGRYKKPVL QSEGWLKFVN YKGLRAGDVV ILETVENQFR GTRFLLRALK YHAEGHYWYD 120 V |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010089599.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | W9QTG0 | 5e-84 | W9QTG0_9ROSA; Uncharacterized protein | ||||
STRING | XP_010089599.1 | 9e-85 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2060 | 7 | 78 |
Link Out ? help Back to Top | |
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Entrez Gene | 21403859 |