PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010088985.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Dof

Protein Properties

Length: 401aa MW: 41811.9 Da PI: 8.7394

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010088985.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1e-38	69	127	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_010088985.1 69 SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSN 127 57899***************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.4E-32	71	126	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.516	72	126	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	3.0E-25	72	125	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	74	110	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MIQELLGGAG LLAGERKISI NGSGGILEAA TLPHSLSPSP SPSPSSSTTI ANATATTISA 60 ATETSSSNSE NLRCPRCDSS NTKFCYYNNY NLTQPRHFCK TCRRYWTKGG ALRNVPIGGG 120 CRKNKSNTVV SASAGKSVTT TGKMKMVATE IGVRPGFGAA GFDPDLSSTP ILWGSPQNSH 180 LLALLRSAHQ NPNPNPNPLC SSANASLNNV KEEGSSGNGL IGSHMMSSTA TETSSAALNG 240 TVNIGRSLGL DPMAQVPSLG LCSSFWRSSS LSNNSQNHQQ TYHQQNGFTQ LGEAAHSNGT 300 SGIQELYQRL RSSTSSSSAA NNYFNDQTAV VLTHHHHNHH GGSNSSHSSS SSANSTSTTK 360 TMTTSILESA PVGGGGELGF WNNQAAAFSW SDLPTTNGAY P

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MIQELLGGAG LLAGERKISI NGSGGILEAA TLPHSLSPSP SPSPSSSTTI ANATATTISA  60
ATETSSSNSE NLRCPRCDSS NTKFCYYNNY NLTQPRHFCK TCRRYWTKGG ALRNVPIGGG  120
CRKNKSNTVV SASAGKSVTT TGKMKMVATE IGVRPGFGAA GFDPDLSSTP ILWGSPQNSH  180
LLALLRSAHQ NPNPNPNPLC SSANASLNNV KEEGSSGNGL IGSHMMSSTA TETSSAALNG  240
TVNIGRSLGL DPMAQVPSLG LCSSFWRSSS LSNNSQNHQQ TYHQQNGFTQ LGEAAHSNGT  300
SGIQELYQRL RSSTSSSSAA NNYFNDQTAV VLTHHHHNHH GGSNSSHSSS SSANSTSTTK  360
TMTTSILESA PVGGGGELGF WNNQAAAFSW SDLPTTNGAY P

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010088985.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP662911	2e-48	KP662911.1 Cajanus cajan Dof7 (Dof7) gene, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010088985.1	0.0	dof zinc finger protein DOF2.4
TrEMBL	W9QGW0	0.0	W9QGW0_9ROSA; Dof zinc finger protein
STRING	XP_010088985.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7219	32	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-35	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Entrez Gene	21403174