PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010088933.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 470aa    MW: 51713.9 Da    PI: 5.8689
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010088933.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.4e-10261308455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_010088933.1 261 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 308
                     8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-17255326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.94E-10255312No hitNo description
Gene3DG3DSA:4.10.280.104.3E-17257324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.618257307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-7261308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-9263313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MNRTLPEMLH CLNSVGNLLA GNCTDMTVLD RQRARLKWQQ EQLQQEEQQQ QQDGYFNGSD  60
QLNGIFFNPA QAGQFPGFQG LVGGVSVIGD TTANRPVKPD PSLENGWSEL DRFEMSGIGF  120
GSSATGLANG PGFQMTGAIS RTSSSPPTVA PLTPEVKSRE SFSPEKTSSA AGRESFKKRK  180
ADKVNNTKGV QEDDSREKRA KGSAEEGDSK ITEQNSPKNN NTNANNRESS ADTSKENSKA  240
SEVQKPDYIH VRARRGQATD SHSLAERVRR EKISERMKYL QDLVPGCNKI TGKAGMLDEI  300
INYVQSLQRQ VEFLSMKLAA VNPRLDFNID DLFAKELLII VIFLKQITIK QMFPACAGAG  360
GFQTLGMSAE MSNSPYLQFN PAQQVVSCGG LEMGMNSHDM GLRRTISAPV SIPETFLDTS  420
CYTQIQPPTT WDSELQNLYS TEFNQGRSSI PFSSQPFTGS IEASNLKMEM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010088933.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024030235.10.0transcription factor bHLH63 isoform X1
TrEMBLW9QH030.0W9QH03_9ROSA; Uncharacterized protein
STRINGXP_010088933.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.17e-70cryptochrome-interacting basic-helix-loop-helix 1