PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010088162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 101aa MW: 11164.5 Da PI: 10.0381 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 29.7 | 1.5e-09 | 71 | 90 | 3 | 22 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghav 22 v+Y+eClkNhAaslGgha+ XP_010088162.1 71 VVTYRECLKNHAASLGGHAL 90 589***************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 7.0E-4 | 70 | 89 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 2.9E-6 | 72 | 90 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 11.076 | 74 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence Send to blast |
MEIASTTITA TTANVTAAGT TKSPEAESET PTRIQSAKPL SFSNGVLKRH HPHHNNHHHQ 60 HHHHHHHHAV VVTYRECLKN HAASLGGHAL RLWLPPQLPP P |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010088162.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010088163.2 | 2e-54 | LOW QUALITY PROTEIN: zinc-finger homeodomain protein 9 | ||||
Swissprot | Q9LHF0 | 2e-16 | ZHD9_ARATH; Zinc-finger homeodomain protein 9 | ||||
TrEMBL | W9QF05 | 4e-65 | W9QF05_9ROSA; Uncharacterized protein | ||||
STRING | XP_010088162.1 | 7e-66 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 1e-18 | homeobox protein 34 |
Link Out ? help Back to Top | |
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Entrez Gene | 21396777 |
Publications ? help Back to Top | |||
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