PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010087391.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | AP2 | ||||||||
Protein Properties | Length: 133aa MW: 14657.1 Da PI: 8.4528 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.7 | 2.6e-07 | 110 | 130 | 1 | 21 |
AP2 1 sgykGVrwdkkrgrWvAeIrd 21 s+y+GV++++++grW+++I+ XP_010087391.1 110 SQYRGVTFYRRTGRWESQIWF 130 78*****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MLGLNLSVAS SDTASDSAEK LLESSFSFDD DYYCSSSSEV DRVRTIDLFP ITGGDPSEKE 60 KNSSSSSRRE WLGLSTNATA SFWEGSFGGP TPAAVAAMKK SRRGPRSRSS QYRGVTFYRR 120 TGRWESQIWF VIG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010087391.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010087391.1 | 1e-91 | ethylene-responsive transcription factor RAP2-7 | ||||
TrEMBL | W9QYC9 | 2e-90 | W9QYC9_9ROSA; AP2-like ethylene-responsive transcription factor TOE2 | ||||
STRING | XP_010087391.1 | 4e-91 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60120.2 | 1e-08 | target of early activation tagged (EAT) 2 |
Link Out ? help Back to Top | |
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Entrez Gene | 21401387 |