PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

XP_013904719.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium

Family

Protein Properties

Length: 264aa MW: 27307.2 Da PI: 5.3277

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_013904719.1	genome	BU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.4	1.6e-08	197	239	7	49
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 er kqk Re+A+rsR R+ a++++Le++ k+L e ++L+ l XP_013904719.1 197 ERIKQKRRESAQRSRNRRAAYMKQLENENKALRDEVSRLRAAL 239 5668999****************************99999765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0039	191	257	IPR004827	Basic-leucine zipper domain
CDD	cd14686	2.58E-9	197	239	No hit	No description
Gene3D	G3DSA:1.20.5.170	7.5E-7	197	238	No hit	No description
SuperFamily	SSF57959	1.55E-5	198	238	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MCYATCGPVA PAPASNPPAD AFVDDVDAFA WLDALDDDLG LVGPSADESA ESSQIKMEGS 60 GASVAQQQQQ QQVMGASQQA VHQQAVSWPM AMAMAPFPPM YAAPWMGMAG AMMAPPQMVA 120 PPPMPAPQVM APPQAAPAVV APKVAAPPPP APKPAVYAPP TPAPQAPASS SDVSLGEPAP 180 PMSKARKSQA EMDEAIERIK QKRRESAQRS RNRRAAYMKQ LENENKALRD EVSRLRAALG 240 GAGLQAPFKL QAGPAAAAAL AGSS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013904719.1	0.0	hypothetical protein MNEG_2262
TrEMBL	A0A0D2MT33	0.0	A0A0D2MT33_9CHLO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP6903	4	4

Link Out ? help Back to Top
Entrez Gene	25735140

Publications ? help Back to Top
Bogen C, et al. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics, 2013. 14: p. 926 [PMID:24373495]