PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

XP_013895154.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium

Family

Protein Properties

Length: 179aa MW: 18718.1 Da PI: 10.1508

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_013895154.1	genome	BU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.3	1.9e-09	106	162	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ rr++ NR +++r R+R+ +e++eL+ +++ L++eN+aL ++e l+ a++ XP_013895154.1 106 RVRRRREINRNSQKRIRERRGKELDELRLEAQRLSSENEALLGQVEALTLARAEVLR 162 5679******************************************99988877665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-5	102	166	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.1E-8	103	157	No hit	No description
PROSITE profile	PS50217	9.944	104	167	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.75E-5	104	154	No hit	No description
Pfam	PF07716	4.9E-5	107	154	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MANADRGHQV GGRGSAVKEG VGEEESISGS RSPKQQAVGS QTNDEATGPS SARVRGGGGG 60 RSSARRQRTG GRGRTGASGG GGGPAADSDG GDDDGAGASG GDGDERVRRR REINRNSQKR 120 IRERRGKELD ELRLEAQRLS SENEALLGQV EALTLARAEV LRQVQDLTDK WQQSIAENA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013895154.1	1e-118	hypothetical protein MNEG_11827
TrEMBL	A0A0D2LXJ8	1e-116	A0A0D2LXJ8_9CHLO; Uncharacterized protein

Link Out ? help Back to Top
Entrez Gene	25729128

Publications ? help Back to Top
Bogen C, et al. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics, 2013. 14: p. 926 [PMID:24373495]