PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.O00889.1.p | ||||||||
Common Name | LOC105967768, MIMGU_mgv1a010637mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 307aa MW: 34673.7 Da PI: 6.4457 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.9 | 4.2e-09 | 152 | 199 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Migut.O00889.1.p 152 SHSLAERARREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 199 8*************************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 7.72E-8 | 146 | 203 | No hit | No description |
SuperFamily | SSF47459 | 1.57E-16 | 146 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.237 | 148 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.6E-17 | 148 | 216 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.0E-6 | 152 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.2E-10 | 154 | 204 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0009637 | Biological Process | response to blue light | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MLRLHQSSPS TSSSSSSSEK NLMEQKQSSA LLHHRRLYQE QTNSWHNQDT RHVDLLSAVD 60 LSHHFPYHSI PKPEWQCNSS SLINREKRKA QFDMEENSEN IVEAEEEKSE ITAKTEMETS 120 GNTCSKESSK VSEVQKPDYI HVRARRGQAT DSHSLAERAR REKISKKMKC LQDLVPGCNK 180 VTGKAGMLDE IINYVQSLQK QVEFLSMKLA TVNPRLDFNV DDIFAKEIPA YISSLQAAQF 240 EATCLHYNTM QQGTSNCGGD ISLDQSQMLP HNKAENALLD PSFISQLQQL SGWESDWPSL 300 FNAGFH* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.O00889.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012847836.1 | 0.0 | PREDICTED: transcription factor HBI1-like | ||||
Refseq | XP_012847837.1 | 0.0 | PREDICTED: transcription factor HBI1-like | ||||
TrEMBL | A0A022QLX6 | 0.0 | A0A022QLX6_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4000 | 21 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36540.1 | 3e-54 | BR enhanced expression 2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.O00889.1.p |
Entrez Gene | 105967768 |