PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00574.1.p
Common NameLOC105976947, MIMGU_mgv1a023103mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 186aa    MW: 21402.4 Da    PI: 10.1828
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00574.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.52e-141661247
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                      ri+ +s    tfskRr g++ KA+ +S  C+a+vav+++s+tgk +
  Migut.O00574.1.p 16 RIKKDSDCFATFSKRRLGLFRKASDVSAQCNADVAVVVYSPTGKPF 61
                      7888888999*********************************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006619.203767IPR002100Transcription factor, MADS-box
SMARTSM004329.3E-18766IPR002100Transcription factor, MADS-box
SuperFamilySSF554554.84E-21879IPR002100Transcription factor, MADS-box
PRINTSPR004041.4E-11929IPR002100Transcription factor, MADS-box
PfamPF003191.7E-171663IPR002100Transcription factor, MADS-box
PRINTSPR004041.4E-112944IPR002100Transcription factor, MADS-box
PRINTSPR004041.4E-114465IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MERKRTKGRQ KIAIARIKKD SDCFATFSKR RLGLFRKASD VSAQCNADVA VVVYSPTGKP  60
FSFFHPTMES VVSRIENPNP KTSDSFRLFE AYTRTRVMQL NQMIEKLDGE LHAEVEREKK  120
LEDETKKKKN RTVSFWEEEE AVGKFDEEQV KNVTNLLENI KARLRVREDE LKRGASSSSS  180
PFLLH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00574.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857673.11e-134PREDICTED: agamous-like MADS-box protein AGL62
TrEMBLA0A022RWG11e-133A0A022RWG1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38220138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-23AGAMOUS-like 62