PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.O00498.3.p | ||||||||
Common Name | LOC105967773, MIMGU_mgv1a004496mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | B3 | ||||||||
Protein Properties | Length: 523aa MW: 58885.1 Da PI: 5.4598 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.5 | 2.1e-17 | 32 | 122 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+++ +d+++ l+lp+kfa++ + +++ +ed++g++W v++ + +g+ l kGW++F ++++++ gDfvvF +++ s f v Migut.O00498.3.p 32 FIKIMIGKDHTE--VLYLPRKFARKVVHLA--NQETEIEDSNGEKWPVTF--SYFDGSLSLHKGWNRFYQEHRMEMGDFVVFNYKEGSHF--V 116 667775555554..59*********95443..3478899***********..55666688************************987888..9 PP EEEE-S CS B3 94 vkvfrk 99 v+++ + Migut.O00498.3.p 117 VQIYGR 122 998865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 6.47E-22 | 29 | 123 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 13.888 | 30 | 123 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.7E-21 | 30 | 123 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.72E-16 | 31 | 120 | No hit | No description |
Pfam | PF02362 | 2.7E-15 | 32 | 122 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.1E-13 | 32 | 123 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 2.19E-6 | 427 | 498 | No hit | No description |
SuperFamily | SSF101936 | 1.84E-7 | 431 | 498 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.8E-4 | 445 | 500 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 7.683 | 454 | 518 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence Send to blast |
MVRRVVAPDS CGKNREAFRE KQKEVSPIVT RFIKIMIGKD HTEVLYLPRK FARKVVHLAN 60 QETEIEDSNG EKWPVTFSYF DGSLSLHKGW NRFYQEHRME MGDFVVFNYK EGSHFVVQIY 120 GRNALERINF NKVRTRENKR PRPDPPAFPQ EEEPLSGPDS RKRKTDPVEK KNADVADLTC 180 MIDLTCMVDR DNVHYEREDR GFLFDLSNFE MKKEALDPNK IVGPVQMDVE INKLDTNEES 240 SRAEMDVICE GDLGNGFGGE IAPRDAEFTV DATPIKGEEI ASCYAEFTVD ATPIKSEDVA 300 PCHAQITADA TRVDVHSDKF LAESSDKSNS CKNAIDNIIS SFRDVLEKSE VFAGKEYASP 360 FASSALKDLF GKCAIKKELV EVEDIPDRFL GVSCEKVTSA PLVVKPEPDL LYDAVPFGAI 420 GQFSAVVKSL SFLELPIHIP SHPTRRESGY GKFVRVRDPM GRHWMILNPA IFSLKALTGN 480 WTEFCLANGI KLGDECRFNP KMMISTLTGL ILFVINGEFL RG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 142 | KRPRP |
2 | 159 | 164 | SRKRKT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.O00498.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012847843.1 | 0.0 | PREDICTED: uncharacterized protein LOC105967773 isoform X2 | ||||
TrEMBL | A0A022QQ49 | 0.0 | A0A022QQ49_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53310.1 | 1e-08 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.O00498.3.p |
Entrez Gene | 105967773 |