PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00367.1.p
Common NameLOC105967775, MIMGU_mgv1a022521mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 248aa    MW: 27158.6 Da    PI: 7.3848
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00367.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19111161255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +++GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  Migut.O00367.1.p 111 HFRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAYRIRG 161
                       69*******.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-31110170IPR001471AP2/ERF domain
PROSITE profilePS5103223.96111169IPR001471AP2/ERF domain
SMARTSM003801.3E-37111175IPR001471AP2/ERF domain
PfamPF008471.1E-13111161IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-23111170IPR016177DNA-binding domain
CDDcd000185.78E-30111170No hitNo description
PRINTSPR003671.8E-10112123IPR001471AP2/ERF domain
PRINTSPR003671.8E-10135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MYKSITSHEL TAVYCRSSSF SSLMPCLTDT WGDLPLKVDD AEDMVIYSLL RDAVTDGWTP  60
FTNPKPEPEP EPELCRFQVW PPEMSFATTT TVREDDYVAA APAATRPKGR HFRGVRQRPW  120
GKFAAEIRDP AKNGARVWLG TYETAEEAAL AYDRAAYRIR GSKALLNFPH RAGSNEPEPV  180
RVAGKRRSSE SVLLSAVSSG SGSGSPKRMK KGAVVENTET EVESRSSVSQ VECQMTQLPA  240
GSQLLVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-37108176270ATERF1
3gcc_A8e-37108176270ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00367.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847845.10.0PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404791e-97ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A022QIS70.0A0A022QIS7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40542245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-51ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]