PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N03367.1.p | ||||||||
Common Name | LOC105968222, MIMGU_mgv1a013010mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27044.5 Da PI: 4.8373 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.5 | 4.2e-12 | 179 | 224 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++Le+Av Y+k Lq Migut.N03367.1.p 179 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVVYVKFLQ 224 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.399 | 173 | 223 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.7E-15 | 176 | 234 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 9.13E-11 | 177 | 228 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.5E-15 | 178 | 236 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.6E-12 | 179 | 229 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.6E-9 | 179 | 224 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042335 | Biological Process | cuticle development | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MQPPKGRESG ATELSRSSSS GGGGLARYRS APATWLEALL ESDDEQPPQL LLDTPNAEDI 60 DLELFESTSG GGLSNFLRMN SSPADFLSLL SNSEAYFPNL PIPGNHFDYV SSPPPAKRPR 120 QAEDLDKLSP KLVSSSSSTI LLKGELQDEP LDVEMEKLLE DSVMCRTRAK RGCATHPRSI 180 AERVRRTRIS DRIRKLQELV PNMDKQTNTA DMLEEAVVYV KFLQKQIQEL TEHQKDCKCL 240 IND* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00181 | DAP | Transfer from AT1G35460 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N03367.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848299.1 | 1e-179 | PREDICTED: transcription factor bHLH80 isoform X1 | ||||
Swissprot | Q9C8P8 | 2e-63 | BH080_ARATH; Transcription factor bHLH80 | ||||
TrEMBL | A0A022QLR5 | 1e-160 | A0A022QLR5_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11787 | 19 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 2e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N03367.1.p |
Entrez Gene | 105968222 |