PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N03295.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26550.2 Da PI: 5.0354 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.4e-18 | 33 | 83 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa +l+g Migut.N03295.1.p 33 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSHSTPEAAARAYDAALFCLKG 83 59*****998.**********9...336************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.14E-19 | 33 | 91 | No hit | No description |
PROSITE profile | PS51032 | 20.613 | 34 | 91 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-19 | 34 | 93 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 6.8E-32 | 34 | 97 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.4E-11 | 34 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-28 | 34 | 91 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.0E-8 | 35 | 46 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.0E-8 | 57 | 73 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MVKAEKKMAA ALITNDALIM SSSSSSSSSE YKKKYKGVRM RSWGSWVSEI RAPNQKTRIW 60 LGSHSTPEAA ARAYDAALFC LKGSSANFNF PFSIRNYSDN TSSIMSPKSI QRVAAAAANT 120 NTNTSTNNNP TNFLDENLNI LSPQSASASV STSVSASSLN GADSSPSLSS SSPNHPETTL 180 HSIEDDLISL ATTTPFDGDD YSWYNFESPK YYTEMVNGVF FDPHMIMEDS YEDAADIRLW 240 SFC* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N03295.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853346.1 | 1e-178 | PREDICTED: ethylene-responsive transcription factor ERF014 | ||||
TrEMBL | A0A2Z7BEZ9 | 5e-55 | A0A2Z7BEZ9_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-35 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N03295.1.p |