PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N03245.1.p
Common NameLOC105972952, MIMGU_mgv1a010639mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 307aa    MW: 34191.5 Da    PI: 5.9302
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N03245.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-112470348
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48
                       WT eEd+ + +a +++  +  +W++Ia+ ++ g+t +++k+++ +++
  Migut.N03245.1.p 24 YWTREEDKAFENALALYHDDpnQWEKIAEAVP-GKTIEDLKLHYEDLR 70
                      5*****************99************.***********8875 PP
2Myb_DNA-binding36.41.2e-11109153347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W+   + +++++ +++G+g+Wk+Iar    g+t  q+ s+ qky
  Migut.N03245.1.p 109 PWSVKQHRQFLEGLEKYGKGDWKSIARNCVAGKTNSQVASHAQKY 153
                       7***************************999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.1761774IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-62068IPR009057Homeodomain-like
SuperFamilySSF466896.1E-102180IPR009057Homeodomain-like
SMARTSM007177.9E-82172IPR001005SANT/Myb domain
PfamPF002492.3E-92469IPR001005SANT/Myb domain
CDDcd001672.64E-102566No hitNo description
PROSITE profilePS5129415.488101158IPR017930Myb domain
SuperFamilySSF466891.0E-13105158IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-15105156IPR006447Myb domain, plants
SMARTSM007173.1E-7106156IPR001005SANT/Myb domain
CDDcd001672.03E-8109154No hitNo description
Gene3DG3DSA:1.10.10.601.6E-8109155IPR009057Homeodomain-like
PfamPF002491.8E-8109153IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDTDWTVSSS SWYWEEDKIF RNSYWTREED KAFENALALY HDDPNQWEKI AEAVPGKTIE  60
DLKLHYEDLR ADVVAIESGD VPLPKYPNNV SVPQMSKKPP RRGVKRGIPW SVKQHRQFLE  120
GLEKYGKGDW KSIARNCVAG KTNSQVASHA QKYFKRLKLG SKKGKRPSIN DIRTVHPETT  180
PPAVEEPALP VYPKGASTSI APFGGVTSGP QFASSQAMMM SAEADPGLPA WSMFVGPYGS  240
QPIIQEPVCS SAEMMSAYCY YHPRTERMVQ ESGGVAAASY GSFDIPFTSE FGDLDVEEFV  300
LPHFLD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A1e-1325861173RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N03245.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853388.10.0PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H71e-42DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A022Q9B50.0A0A022Q9B5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1515946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.18e-40Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]