PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02732.1.p
Common NameLOC105959235, MIMGU_mgv1a009272mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 348aa    MW: 37664.6 Da    PI: 10.0367
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02732.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30276333359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeH h 
  Migut.N02732.1.p 276 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPGMLIVTYEGEHSHA 333
                       99************************988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.1E-16227272IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-32262333IPR003657WRKY domain
PROSITE profilePS5081130.435269335IPR003657WRKY domain
SuperFamilySSF1182901.31E-26271334IPR003657WRKY domain
SMARTSM007744.1E-37274334IPR003657WRKY domain
PfamPF031062.7E-26276332IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MAVELMPGYR FTSKMEANAA QEAAAAGLQS VENLIRLLSN SHHQNFPDQQ QSSSKYQSSE  60
PIAAAAAADY QAAADYQAVA DVAVNKFKKF ISILDQTPRT GHARFRRGPI SNPTQKVKPA  120
GPPAQPPKTE ENSTVPAPGS RIYCPTPVQR LPPLPQNHLQ LLKNATVERK ESTTINFASP  180
ATSFMSSLTA GDTDSLQPSM SSSGFQITNL SQVSSVGRPP LSTSSFKRKC NSMDDANTKC  240
GGASSRCHCP KKRKSRLKKV VRVPAISMKM ADIPPDDYSW RKYGQKPIKG SPHPRGYYKC  300
SSVRGCPARK HVERALDDPG MLIVTYEGEH SHAVNNTEAP ALVLESS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-19262332271WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02732.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838747.10.0PREDICTED: probable WRKY transcription factor 7
SwissprotQ9STX07e-91WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A022R9A50.0A0A022R9A5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.17e-67WRKY DNA-binding protein 7