PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02591.2.p
Common NameLOC105959128, MIMGU_mgv1a0095201mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 340aa    MW: 37382.3 Da    PI: 8.9549
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02591.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.73.8e-19211244134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C++C++ kTp+WR+gp g+ktLCnaCG++yr+ +
  Migut.N02591.2.p 211 CTHCQVMKTPQWREGPAGPKTLCNACGVRYRSGR 244
                       *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011411.517205241IPR000679Zinc finger, GATA-type
SMARTSM004014.4E-15205255IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.7E-15208268No hitNo description
Gene3DG3DSA:3.30.50.102.0E-14209242IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.09E-14210267No hitNo description
PROSITE patternPS003440211236IPR000679Zinc finger, GATA-type
PfamPF003209.6E-17211244IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MSEVKEPYIC WEAIVNGTAG EAELDNILSI LDYPVESFEG DEEFVGDWDS TKSEFLGPIP  60
SDVLIGQPVI GHNKSTPIAP VDATPYPNKS IEVKEQGIFQ TQSPVSVLES SRSTSSGKSP  120
LIKSRITKRA RSKRARKPSG LSPWHLIPTL FASCPDAVKK RGRRKKLPQQ AIENSSSLKA  180
IIQFQGCSER PTELQSSAAQ QRSPTATTKR CTHCQVMKTP QWREGPAGPK TLCNACGVRY  240
RSGRLFPEYR PAASPTFVPT VHSNSHRKVV EMRTKGQNGK IEERSVVVET RTEGQNGKIE  300
ERSVVIETRT EGQNGKTEER SMEVIVPVSS SSCSFDHVC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02591.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838617.10.0PREDICTED: putative GATA transcription factor 13
TrEMBLA0A022R8X10.0A0A022R8X1_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.23e-37GATA transcription factor 11