PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N02448.1.p | ||||||||
Common Name | MIMGU_mgv1a024694mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | B3 | ||||||||
Protein Properties | Length: 182aa MW: 20854.2 Da PI: 5.2964 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 32.4 | 1.7e-10 | 71 | 180 | 2 | 97 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHH.HHHHHHT--TT-E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg...rsWevkliyrkksgryvltkGWk.eFvkangLkegDf 79 k lt+sdv+ s+rl lp+k +++h +++e + ++++ d + +kl + +s++yvl+k+W+ +Fv+ gL e+ Migut.N02448.1.p 71 TKSLTKSDVNGSSRLLLPRKLVQDHilvhldnvelaAINEEDGLEVSVLDVDTdthHILAFKL--WSSSKSYVLAKNWSsDFVRRRGLSENRE 161 5899*********************99999999999888888889999997776667778888..*************736********9998 PP EEEEE-SS.SEE..EEEEE CS B3 80 vvFkldgr.sefelvvkvf 97 + ++ d+r +++l +++f Migut.N02448.1.p 162 IGIRWDRRpGSRSLEFTLF 180 8888888877777777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.92E-12 | 65 | 169 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 8.23E-12 | 68 | 181 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 2.1E-12 | 70 | 171 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.5E-7 | 71 | 180 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MTRLTLGWWG PHTPTTIIES DDDQVVLEPP PDDNNNNNNN NNNNNNPFLE LRIGPPIQRR 60 RVFPDGYWEI TKSLTKSDVN GSSRLLLPRK LVQDHILVHL DNVELAAINE EDGLEVSVLD 120 VDTDTHHILA FKLWSSSKSY VLAKNWSSDF VRRRGLSENR EIGIRWDRRP GSRSLEFTLF 180 D* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N02448.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012838154.1 | 2e-71 | PREDICTED: B3 domain-containing protein At2g33720-like | ||||
TrEMBL | A0A022RAT2 | 1e-127 | A0A022RAT2_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 2e-18 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N02448.1.p |