PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02188.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 173aa    MW: 18738.3 Da    PI: 10.3158
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02188.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.4e-212980156
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+ +l+g+
  Migut.N02188.1.p 29 PHFRGVRKRP-WGRYAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAAMSLRGA 80
                      689*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.59E-292986No hitNo description
PfamPF008475.7E-142979IPR001471AP2/ERF domain
SMARTSM003804.7E-333093IPR001471AP2/ERF domain
PROSITE profilePS5103221.973087IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-213087IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-303087IPR001471AP2/ERF domain
PRINTSPR003674.2E-103142IPR001471AP2/ERF domain
PRINTSPR003674.2E-105369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MVVEKLHNPS GGAAAAAAAQ PPFPAKKGPH FRGVRKRPWG RYAAEIRDPW KKTRKWLGTF  60
DTAEEAALAY DEAAMSLRGA RAKTNFTYGG GGGVSAAAPP MSVNLGYWRT PEFSRPIAEP  120
KESASPTPSP SEYKGYKMEE VGAVVMSEQG KQIRSEKNRP FLFDLNLPAP LF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-222786262ATERF1
3gcc_A2e-222786262ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02188.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828889.11e-122PREDICTED: ethylene-responsive transcription factor 11-like
TrEMBLA0A022PQ951e-106A0A022PQ95_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.16e-22ERF domain protein 12