PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N01984.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 278aa MW: 31349.7 Da PI: 5.2618

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N01984.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	78.1	1e-24	14	73	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + l+cprC+s +tkf y+nn +qPr+ C +C++ Wt GG lrnvP+Gg ++nk+++ Migut.N01984.1.p 14 PTPLRCPRCNSIDTKFRYFNNSDPAQPRHHCWSCNQKWTVGGKLRNVPIGGKHKNNKQTK 73 56789************************************************9999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-14	11	71	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-24	17	71	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	21.669	17	71	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence Send to blast
MEQVNGESHQ QQQPTPLRCP RCNSIDTKFR YFNNSDPAQP RHHCWSCNQK WTVGGKLRNV 60 PIGGKHKNNK QTKESSSTRT DPQTQLSQPP LRLGEERLQY LQSLTPMATM VPQRLDTSMI 120 QPIINMSTTV SPSNSYYFND EISCLDAIQT LIRSDGINQH RDVGYQFGNG GANMEIPRDW 180 NIQPIASQHD LPQQISGFVD SYETQNQVNN ATPNLYDYSW VQPTCPMSSL PQNIMNNFGV 240 STSNSCPWNN FTGTITTADT ETDITSVNVD EWLNFPD*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N01984.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012846307.1	0.0	PREDICTED: dof zinc finger protein DOF3.2-like
STRING	Migut.N01984.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16144	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45610.1	3e-19	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.N01984.1.p