PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01838.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 425aa    MW: 47888.9 Da    PI: 4.8058
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01838.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like52.88.5e-17181230555
           G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +W+ eLH++F+ a  +L G  +  Pk+ile m+v+ Lt+ +v+SHLQk R 
  Migut.N01838.1.p 181 EWSDELHQKFMVAAIEL-GDGRCYPKEILERMNVPELTRMQVASHLQKCRN 230
                       7****************.9*****************************995 PP
2Response_reg31.21.1e-111910813103
                       HHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS-- CS
      Response_reg  13 llrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfd 103
                          ++l    y ev+ ++ +++al +l + +  +Dl++  ++ p++ Gl+ll+   +++  l  i+++  +++  +++a++ Ga  ++ Kp+ 
  Migut.N01838.1.p  19 KTLNMLHYYSY-EVTPVKLASSALSILSKDKvkFDLVVANLNSPDSCGLQLLQDVVKRD--LLLILMSNDDDPVVITRAIEQGAFLCIKKPVT 108
                       55577888899.9999***********988889**********************9988..9*****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23004.2E-163126No hitNo description
SuperFamilySSF521722.13E-143128IPR011006CheY-like superfamily
SMARTSM004480.00445115IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011020.6396120IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.4E-77109IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.35E-78110No hitNo description
SuperFamilySSF466894.3E-12176229IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-16177230IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-15180231IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MAQKIHVLLV EPDSKDHDKT LNMLHYYSYE VTPVKLASSA LSILSKDKVK FDLVVANLNS  60
PDSCGLQLLQ DVVKRDLLLI LMSNDDDPVV ITRAIEQGAF LCIKKPVTMQ IAGYLWQHVL  120
SQKVSRLKEN ERVGDFIIEF GNQLDNAQEI QESKKNNVMN FINGSTSQND SVLVKKKVWA  180
EWSDELHQKF MVAAIELGDG RCYPKEILER MNVPELTRMQ VASHLQKCRN AKWLPPGKRK  240
SKQDNHNTET VTTAPKPKVG RSRTERFGSM PRLDDYTKSH LAQKYQQEMN NQEFAIDNPP  300
MIESNNMHGN FNPGVEGYNS QLLLGHDNTN YPFALDNNDA FNMGQIGETF GIDDEQLIMY  360
GFQNATPNSD DVTNSMGLGM DYNGSFQSLV LDADVNFNQM SIVGNAINEW GEGEESMKDE  420
EIDG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01838.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830622.10.0PREDICTED: two-component response regulator ARR2-like
TrEMBLA0A022RSD30.0A0A022RSD3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-30response regulator 2