PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01778.1.p
Common NameMIMGU_mgv1a020754mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 308aa    MW: 32879.4 Da    PI: 7.6352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01778.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.4e-15169216355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++h++ E++RR++iN++++ L++l+P++      K + a+iL  ++eYIk+Lq
  Migut.N01778.1.p 169 AMHSQSEKKRREKINQRMQILQKLVPNC-----NKIDRASILDDVIEYIKQLQ 216
                       579************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-18164224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.768166215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-17166222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-12170216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.63E-15171220No hitNo description
SMARTSM003531.1E-15172221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MSHCFPAGWD IHGGSSAPTP PPPGLTTPPI LPPDVPLSWE EPRAAGTLES VVNQAIVTSH  60
PRLRESGDGG NHHHHQPAAV ITDAALVPAC DTTTNYSTIR SYNINNQQNS KHAVPEFFPE  120
TPHSGAAAAA STTHGGAGFC SCKTNRDDGG KKGEYGKPLN SKGKSRAAAM HSQSEKKRRE  180
KINQRMQILQ KLVPNCNKID RASILDDVIE YIKQLQSQVE MMCLMNMPSL VMLPLGIQPH  240
HLQISMVDTG LGMSSGSGSG TGMCMGMGRL VDMDTIGRAA TMPPWPPAIT TFMPPMAASS  300
DFQHSPF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175180KKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01778.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831362.11e-137PREDICTED: transcription factor UNE10-like
TrEMBLA0A022RRJ80.0A0A022RRJ8_ERYGU; Uncharacterized protein
STRINGMigut.N01778.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.19e-29bHLH family protein