PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01663.1.p
Common NameMIMGU_mgv1a022171mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 383aa    MW: 40816.6 Da    PI: 5.4628
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01663.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox36.86.9e-12222267247
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvW 47 
                       rk+ +++keq   Lee F+++++++ ++++ LAk+l+L  rqV vW
  Migut.N01663.1.p 222 RKKLRLSKEQSAYLEESFKEHNTLNPKQKQALAKQLNLRPRQVEVW 267
                       788899**************************************** PP
2HD-ZIP_I/II91.69.2e-30222305192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       +kk+rlskeq++ LEesF+e+++L+p++K++la++L+l+prqv+vW       tk+kq+E+d+e+Lkr++++l+ en+rL+kev+eLr +lk
  Migut.N01663.1.p 222 RKKLRLSKEQSAYLEESFKEHNTLNPKQKQALAKQLNLRPRQVEVW-------TKLKQTEVDCEYLKRCCETLTVENRRLHKEVQELR-ALK 305
                       69********************************************.......8*********************************9.555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.3E-13206267IPR009057Homeodomain-like
SuperFamilySSF466891.11E-10209267IPR009057Homeodomain-like
PROSITE profilePS5007111.564218278IPR001356Homeobox domain
SMARTSM003893.3E-5220277IPR001356Homeobox domain
CDDcd000861.94E-9222267No hitNo description
PfamPF000463.1E-9222267IPR001356Homeobox domain
SMARTSM003403.1E-22271316IPR003106Leucine zipper, homeobox-associated
PfamPF021832.7E-11271305IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MELGLSLGFL DKNIQNQNQK KKINNGGLDF CIALGLNSVA VGNDRETEIR QTQQSHENDD  60
EDGGDGGGGG GGGGCEISDD GDGSDDNTPG EAHLQLNLAP VVPRRRLSSH IQSFPWSSDN  120
VFGPSEGSSE NGGSSGNIGA AAAWGLDVNR LPEAAASAAE DVSSENTAGS PFNLGFGVYR  180
NTENPPSGAA GKRDFDAAAV GNDGSAGSSR ASDDDENGVN ARKKLRLSKE QSAYLEESFK  240
EHNTLNPKQK QALAKQLNLR PRQVEVWTKL KQTEVDCEYL KRCCETLTVE NRRLHKEVQE  300
LRALKTTSNN PFYTQLPATT LTMCPSCERV ATTTAAAAAV SPPTANNNNN SITKAIGFPV  360
SRPRFYPFSQ TPTHHHNSKS SV*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01663.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831337.10.0PREDICTED: homeobox-leucine zipper protein HOX11-like
SwissprotA2YW032e-67HOX27_ORYSI; Homeobox-leucine zipper protein HOX27
SwissprotQ6YPD02e-67HOX27_ORYSJ; Homeobox-leucine zipper protein HOX27
TrEMBLA0A022RQC60.0A0A022RQC6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.19e-59homeobox from Arabidopsis thaliana