PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N01652.1.p | ||||||||
Common Name | MIMGU_mgv1a010598mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | C2H2 | ||||||||
Protein Properties | Length: 308aa MW: 34533.7 Da PI: 9.3854 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.00098 | 244 | 263 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F ++ L+ H++++ Migut.N01652.1.p 244 CSQCGKQF-KPEKLHAHMKSC 263 ********.**********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF06136 | 2.3E-40 | 13 | 168 | IPR010369 | Protein of unknown function DUF966 |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MEAQSDAEVR RLHVVYFLSR KGFVEHPHLI RIHQLSKNGV RLRDIKRWLG ELRGEDMPES 60 FSWSYKRKYK TGYVWQDLLD DDLVTPISDN EFVLKGSEIS STTNNNTESS ETTSIYVPTK 120 PSSEIEESSI DSETSTLTDE YSDKIMQEAK SSIFGSTFVT KEKNEKTTNK VKVADSSSNK 180 PNCTSNIFRN LITCGAVDTN DSALKVKNKS KIRDGAKDSS KKKVHFSEQM VSRPSYKPLN 240 GPNCSQCGKQ FKPEKLHAHM KSCKGNKALA KASSNPSIYA TNSDNISQIS TKLFKNEDSV 300 SSYLLTR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N01652.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831366.1 | 0.0 | PREDICTED: protein UPSTREAM OF FLC-like | ||||
TrEMBL | A0A022RQF7 | 0.0 | A0A022RQF7_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5206 | 13 | 15 |
Link Out ? help Back to Top | |
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Phytozome | Migut.N01652.1.p |