PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01354.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Nin-like
Protein Properties Length: 649aa    MW: 72179.5 Da    PI: 6.3356
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01354.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK901.8e-28362412252
            RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ek+isl dl+++Fs+++k+AAk++gvc+T+LKriCRq+GI RWP+Rkik++
  Migut.N01354.1.p 362 EKTISLRDLRQHFSGSLKEAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 412
                       799**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.416351432IPR003035RWP-RK domain
PfamPF020427.3E-26364412IPR003035RWP-RK domain
SuperFamilySSF542777.85E-20549634No hitNo description
PROSITE profilePS5174520.944550634IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2403.8E-21550631No hitNo description
SMARTSM006664.6E-21550634IPR000270PB1 domain
CDDcd064072.87E-34551633No hitNo description
PfamPF005644.0E-15551633IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    Send to blast
MEDGPFIPLS SHTAIDFNYM DELLYDGFWL ETTTSTHESN FNWPNPSTPI TLLTDDLNPT  60
SFYFPTSDPN INNPNQPRFL HEETAISTTF GEPALTHLEM DEFSENENRR LWVGPNRNPI  120
SVKNRLLQAI NGLDASTRDK DVLIQIWIPV KRGTGQVLTT NNQPFSMNPN SKNLADYRDV  180
SQSYQFAADE DSKEFVGLPG RVFLNKLPEW APDVRFFRRE DYQRVSHAQQ YDVRGSLALP  240
VFEQGSGVCL GVVEIVTTSQ KVDFSPELES ICKALESVDL KSSNIQNRNN GDDDQTMLLN  300
SLSSFTQQNC GSSRVITETC DKGKAVAASS TNDECSGNFS LTIGDASFGT KTSSEKRRTK  360
TEKTISLRDL RQHFSGSLKE AAKSIGVCPT TLKRICRQHG ITRWPSRKIK KVSHSLRKLQ  420
LVIDSVQGAE GSIKLSSFYN NYPNLVSPNL VRGSSHLQPS ENQSDGNNLS SPSKSPPSSD  480
GSHSSSSSLS CSTGAKQSSS IPINGDALSA EKNGVMMLKR AQSDAELHEK CQEKETKLLM  540
RSYSHKIVPS FRVKVAFGEE KIRFGLQPQW GFRELQEEVL RRFNISSIGS CVSLKYLDDD  600
DEWVLLTCDD DLEECTYVHR SSKNRIIKLA VNQASYPNLG SSFGSNGP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01354.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833788.10.0PREDICTED: protein NLP2-like
STRINGMigut.N01354.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.14e-78Nin-like family protein