PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01274.1.p
Common NameLOC105952007, MIMGU_mgv1a010838mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 301aa    MW: 32863 Da    PI: 7.6996
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01274.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.21.1e-18229262134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C++C++ kTp+WR gp g+ktLCnaCG+++++ +
  Migut.N01274.1.p 229 CTHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGR 262
                       *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169921.9E-754299IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011412.281223259IPR000679Zinc finger, GATA-type
SMARTSM004014.7E-15223277IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.81E-14225286No hitNo description
Gene3DG3DSA:3.30.50.102.3E-14226260IPR013088Zinc finger, NHR/GATA-type
CDDcd002027.02E-14228277No hitNo description
PROSITE patternPS003440229254IPR000679Zinc finger, GATA-type
PfamPF003202.4E-16229262IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MECIETRALK SSFLSQMAIK TNSQAFCNDD VWCFAGVNTV SSDEFPVEDL LNLDFSEMEF  60
HGSQLEDDAE AKVGLEEINS SHSPSAFSGA DEFPSLSAAE LAVPVDDLEN LEWLSQFVDD  120
STSGLSLLCP AGSFTGNRVE KVTKPPVQKI RLPFLPFPVQ RKQRSKRSRT TGRRPWYLSS  180
PPLSAGVDSS PTSSSHGSSV VPVPTFFFTA PVQKKKPEAD GGSGSGRRCT HCQVQKTPQW  240
RTGPLGPKTL CNACGVRFKS GRLFPEYRPA CSPTFSQEVH SNSHRKVVEM RLKKEVARGG  300
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01274.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830959.10.0PREDICTED: GATA transcription factor 5-like
TrEMBLA0A022RR850.0A0A022RR85_ERYGU; GATA transcription factor
STRINGMigut.N01274.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11542481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.24e-53GATA transcription factor 5