PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00823.1.p
Common NameLOC105960011, MIMGU_mgv1a010341mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 316aa    MW: 35046.9 Da    PI: 7.8021
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00823.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431e-13159203347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE++l++ + k++G+g+W+ I+r +   Rt+ q+ s+ qky
  Migut.N00823.1.p 159 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKY 203
                       8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512937.7512780IPR017884SANT domain
SMARTSM007171.2E-72880IPR001005SANT/Myb domain
SuperFamilySSF466895.02E-113185IPR009057Homeodomain-like
CDDcd001677.51E-73177No hitNo description
Gene3DG3DSA:1.10.10.602.4E-12150208IPR009057Homeodomain-like
PROSITE profilePS5129420.117152208IPR017930Myb domain
SuperFamilySSF466891.44E-16153207IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-17155207IPR006447Myb domain, plants
SMARTSM007179.2E-13156206IPR001005SANT/Myb domain
CDDcd001679.74E-11159204No hitNo description
PfamPF002495.2E-12159203IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MRWGMEILSP SSYFTSSSWL PDESRRSTAA KWTPAENKAF ENALAVFDES TPDRWQRVAE  60
MVPGKTVRDV IRQYKELEDD VSSIEAGLIP VPGYAAATSL PPPPPPPPPS SSSSPFTLEW  120
GSAHTGFEGF RQSYVIAGGG GRKSSSARPS EQERKKGVPW TEEEHKLFLL GLKKYGKGDW  180
RNISRNFVIS RTPTQVASHA QKYFIRQLSG GKDKRRASIH DITTVHLNDD PASSPENKTV  240
PSPEQSNSGR NIPFQTNNGT IMGGYSSPCL ENVFSSPPNY GMNSYGLKTY DEHESYMESH  300
NMVFQMQSGS HYPNY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-152494373RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00568DAPTransfer from AT5G58900Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00823.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839634.10.0PREDICTED: transcription factor DIVARICATA
SwissprotQ8S9H71e-136DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A022S3970.0A0A022S397_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-85Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]