PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N00673.2.p

Common Name

LOC105954402, MIMGU_mgv1a013234mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

FAR1

Protein Properties

Length: 227aa MW: 25686.7 Da PI: 5.0242

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N00673.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.9	3e-27	58	147	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA++vGF vr+ + ++s+ +g++ r++ C+k+g++ ++k k e++ ra+ r gCka++ k+ek+gkw+vt+++++HnH+l+ Migut.N00673.2.p 58 RFYNDYARRVGFVVRIMQRRRSEIDGRTLARRLGCNKQGFSPNNKGKIGPEKKLRASAREGCKATILFKMEKSGKWVVTRFVKDHNHPLV 147 5***************************************************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.4E-25	58	147	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence Send to blast
MVEGNTGAES ERDDWNSNDS EEDDVIEIEE NNTRSVEGGE VLEPYVGMEF ESEEDARRFY 60 NDYARRVGFV VRIMQRRRSE IDGRTLARRL GCNKQGFSPN NKGKIGPEKK LRASAREGCK 120 ATILFKMEKS GKWVVTRFVK DHNHPLVVTA QEFTNVSDKD KKIQELAREL QRQEELCASY 180 REKLISLLAN VENQTENLSS KVLAVIDNVR KAEAEALSEA LALSVT*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N00673.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012833525.1	1e-165	PREDICTED: protein FAR1-RELATED SEQUENCE 12
TrEMBL	A0A022RKY6	1e-164	A0A022RKY6_ERYGU; Uncharacterized protein
STRING	Migut.N00673.1.p	1e-164	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12850.1	1e-63	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Migut.N00673.2.p
Entrez Gene	105954402