PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N00362.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 301aa MW: 33145.8 Da PI: 10.0926 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3e-16 | 56 | 95 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +eEde +v+a++++G++ W+tIar++ gRt++ +k++w++ Migut.N00362.1.p 56 PEEDETIVRAHAKFGNK-WATIARMLC-GRTDNAIKNHWNST 95 7****************.*********.***********986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 2.1E-11 | 44 | 98 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS51294 | 18.224 | 45 | 100 | IPR017930 | Myb domain |
CDD | cd00167 | 1.53E-11 | 47 | 96 | No hit | No description |
SuperFamily | SSF46689 | 1.2E-12 | 56 | 101 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.0E-17 | 56 | 97 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.7E-13 | 56 | 95 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MVEGKERGCG RREEGRRWCG HPVRRRGCGA RLWRDCGEKE GRSSRRRWST ARFRAPEEDE 60 TIVRAHAKFG NKWATIARML CGRTDNAIKN HWNSTLKRKC VSMSEEFNNF DPEAQPPLKR 120 SASLGPATSA FCFNPGSPSG SDMSDSSHSG HLIYRPIART GGISQSPPDP TREPVTSLSL 180 SLPGSDPNLN SITEPIHNPI PEPDPNHALK PMMVPPKHPN QMISSLPPPP PPPAAAPPLQ 240 MHQFSPAAQP AGVVGEKQFF SAEFLAVMQE MVRKEVRNYM AGLSLSRMGS ACRQKPLEML 300 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1mbj_A | 1e-14 | 57 | 99 | 9 | 51 | MYB PROTO-ONCOGENE PROTEIN |
1mbk_A | 1e-14 | 57 | 99 | 9 | 51 | MYB PROTO-ONCOGENE PROTEIN |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N00362.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012851720.1 | 1e-154 | PREDICTED: transcription factor MYB44-like | ||||
TrEMBL | A0A022QZ93 | 0.0 | A0A022QZ93_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1586 | 24 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 5e-33 | myb domain protein 73 |
Link Out ? help Back to Top | |
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Phytozome | Migut.N00362.1.p |