PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00025.1.p
Common NameLOC105962083, MIMGU_mgv1a009198mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 350aa    MW: 40307.1 Da    PI: 6.4656
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00025.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.19.5e-193380148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd+ l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
  Migut.N00025.1.p 33 RGPWTVEEDLTLINYIAHHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 80
                      89********************************************97 PP
2Myb_DNA-binding51.13.1e-1686129146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  Migut.N00025.1.p  86 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 129
                       7999******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.0322884IPR017930Myb domain
SuperFamilySSF466891.28E-3031127IPR009057Homeodomain-like
SMARTSM007171.1E-153282IPR001005SANT/Myb domain
PfamPF002495.8E-173380IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.3E-233487IPR009057Homeodomain-like
CDDcd001674.42E-123580No hitNo description
SMARTSM007171.3E-1485133IPR001005SANT/Myb domain
PROSITE profilePS5129418.70785135IPR017930Myb domain
PfamPF002496.2E-1586129IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.2E-2388134IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MEHQQHHQGA TASMSMSMNS NSEEEMMMEE VRRGPWTVEE DLTLINYIAH HGEGRWNSLA  60
RCAGLKRTGK SCRLRWLNYL RPDVRRGNIT LEEQLLILEL HSRWGNRWSK IAQHLPGRTD  120
NEIKNYWRTR VQKHAKQLKC DVNSKQFKDT MRYLWMPRLV ERIQSQAQAN NTSLPSSSSS  180
TTTTDQNIPH HQQPNISAAT VHTNYTPENS SDSFGTPASD LTADHCYNNY PINHHQHQQQ  240
GHNINQEYYP VANNIDADNH QLYSDNNDQY HHQYQSSSSL IISPTTAGYF NQQLGGGLDL  300
STEQNSSSQL WMDGGAVDAL SDDLWNNVDD IWFLHEQQQF NFTTNNHFI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C2e-242412718120MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00025.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841820.10.0PREDICTED: transcription factor MYB108-like
TrEMBLA0A022RY830.0A0A022RY83_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13972375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-84myb domain protein 78