PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01946.3.p
Common NameLOC105948786, MIMGU_mgv1a007157mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family AP2
Protein Properties Length: 417aa    MW: 46353.9 Da    PI: 8.4862
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01946.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-1771130155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  Migut.M01946.3.p  71 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 130
                       57*******************766644468557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.19E-1771139IPR016177DNA-binding domain
PfamPF008471.4E-1371130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-1572139IPR001471AP2/ERF domain
SMARTSM003806.5E-2672144IPR001471AP2/ERF domain
PROSITE profilePS5103220.07372138IPR001471AP2/ERF domain
PRINTSPR003674.1E-57384IPR001471AP2/ERF domain
PRINTSPR003674.1E-5120140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MASSSAIRDA KPEEFGGGES SEAAAAAPPP PVETDQMLLY RGLKKAKKER GCTAKERISK  60
MPPCTAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQVYLGA YDEEEAAARA  120
YDLAALKYWG PGTLINFPVT DYTRDLEEMQ NVSREDYLAS LRRKSSGFSR GVSKYRPLSS  180
RWDSQVGRLP GTDYINSALY GDDTATVSEY AGGYSAERKI DLSNYIKWWG TNKSSQTDTR  240
SKALDETHLG FPDDVDSELK ALECSTKQTE PYEMPRLGVP PERMKHKKIS AMSVLSKSAA  300
YKSLQEKISK NKGKEENDEN ENKNNIDKIE MGKTVEKLCH DGGGVAYAIS GGLPIHRNVY  360
PLAPLLPATS YNTIDPLVDP VLWSSLVHAL PTGSSRVNEV MKNESTSDYT FFQQGE*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01946.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827468.10.0PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2
SwissprotQ8GWK21e-146AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLA0A022PRV00.0A0A022PRV0_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-138AP2 family protein