PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M01923.1.p

Common Name

LOC105948700, MIMGU_mgv1a021735mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 294aa MW: 33223.2 Da PI: 4.4616

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M01923.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.1e-10	166	210	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ r+RR++i ++ +eL +l+P +K++ ae+L+ A +YIk+Lq Migut.M01923.1.p 166 SIAARQRRRKITEKTHELGKLVPGG-----QKMNTAEMLQSAYKYIKYLQ 210 6788*****************86.....7****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	13.624	160	209	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.11E-12	162	219	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.26E-9	163	213	No hit	No description
Gene3D	G3DSA:4.10.280.10	2.9E-12	163	216	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.2E-8	166	210	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.5E-11	166	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence Send to blast
MAALSYYSNW GPLQPVMDSD IISMLADPVA TQPELPPELQ TFPDVDYLLE QPNELFYPEN 60 PNSLLYDFTN GTLTEPFSVQ PEIEPSFFNY PKRQKGGDYD EFYSDNNLSF KPSSFFNIQN 120 PSFPTVQDYS PSLPDFPIGY ATGSCGEGLK KDTSTAAGSN TLSAQSIAAR QRRRKITEKT 180 HELGKLVPGG QKMNTAEMLQ SAYKYIKYLQ AQVGILEYID SYDHHHQNRE TESFGKHEEL 240 QVLLESPLIQ EKLYSNEKCI VPQKFIDELS RSDDLIVKSN PELISLIVVK QEH*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M01923.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012827384.1	0.0	PREDICTED: transcription factor bHLH52
TrEMBL	A0A022PXZ4	0.0	A0A022PXZ4_ERYGU; Uncharacterized protein
STRING	Migut.M01923.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3856	22	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34820.1	6e-26	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.M01923.1.p
Entrez Gene	105948700