PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01838.2.p
Common NameMIMGU_mgv1a026531mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 468aa    MW: 50899.8 Da    PI: 6.6444
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01838.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.61.5e-053583961154
                       HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        R +++ +++  L++l+ +      +K + a++L  A+eYIk L
  Migut.M01838.2.p 358 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSDAIEYIKFL 396
                       5778999**********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.366347396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-11357411IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.31E-6357401No hitNo description
SMARTSM003530.006358402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-9361405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MADEFHLGSG NWWDSNNTSR NRFDGGATPP VSISTTLNSI ASFGWPTEMV EMKPSGGSQL  60
LQGGAHDQSS AAAAACGGGL ANPNLQMMGL GLSSHQGIDW NQTLFRGEKA ESSFRSMLEE  120
DMSSNTAGGF EQSGATTQEQ WRSQKVYSDG SPAAAEEESS LNDYKQINIH RGFSLDVHQH  180
HHHHQQLQFS HQASSNDSTI TTSHNLNNSG STFPVDSAAA YGLLLSENQP MNYQYPSGGY  240
GGGASDIIPS WNKFPQFLRQ SPPPKQQPPP PASSGSHLHF TNNAPFWNAS SPASAMSEAA  300
RSSFFPAALQ TQIPPSFDEK PKTSEARESS TTTKKNNTET SNKRPRNETP NPLPAFKVRK  360
EKMGDRITAL QQLVSPFGKT DTASVLSDAI EYIKFLHEQI SALSDPYMKN PASTHHHQKS  420
EKSKDQEGPR QDLRNRGLCL VPVSSTFPVA HETTVDFWTP TFGGSFR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01838.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827623.10.0PREDICTED: transcription factor bHLH123-like isoform X2
TrEMBLA0A022PTR00.0A0A022PTR0_ERYGU; Uncharacterized protein
STRINGMigut.M01838.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.15e-70bHLH family protein