PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01814.1.p | ||||||||
Common Name | LOC105948829, MIMGU_mgv1a012900mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 26113.7 Da PI: 8.6744 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.4e-12 | 78 | 125 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE++RRd++N++f eL ll + + +K +Ka+iL Av+ + +L Migut.M01814.1.p 78 SKACREKQRRDKLNDKFMELGALLEPG---RPPKTDKAAILVDAVRMVTQL 125 5678**********************8...89**************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.459 | 74 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.70E-9 | 77 | 130 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.3E-13 | 78 | 147 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.95E-13 | 78 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-9 | 78 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.9E-9 | 80 | 131 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd14686 | 0.00206 | 130 | 163 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
MVSPENTNWL YDYGFEDNPV PDVNFSAPSA GFSWPMQTLN GSSNVSLQID GSSGESDMQK 60 EAGSKKRTRT EACAPSSSKA CREKQRRDKL NDKFMELGAL LEPGRPPKTD KAAILVDAVR 120 MVTQLRSDAQ KLKDSNLNLQ EKIKELKAEK TELRDEKQRL KAEKDKLEQQ LKTMNTPQPG 180 FLPAPPAIPT AFAAQNQAVG NKMVPIISYP GVAMWQFMPP ASIDTSQDHV LRPPVA* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01814.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012827519.1 | 1e-175 | PREDICTED: transcription factor ILR3 | ||||
Swissprot | Q9FH37 | 1e-119 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A022PY96 | 1e-174 | A0A022PY96_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01814.1.p | 1e-174 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA950 | 24 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-111 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01814.1.p |
Entrez Gene | 105948829 |