PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01737.1.p | ||||||||
Common Name | MIMGU_mgv1a007828mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 395aa MW: 43090.2 Da PI: 6.51 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.4 | 1.9e-30 | 192 | 250 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++v+++tYeg+H h+ Migut.M01737.1.p 192 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDQSVLITTYEGRHSHP 250 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-33 | 176 | 252 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.98E-28 | 184 | 252 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.792 | 186 | 252 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.3E-37 | 191 | 251 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.4E-27 | 193 | 250 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MGFDGIIMEN AAFDHGEKRV IYEMDFFADK NDGTSNVEMF DAAETEQENH QQHINTGLNL 60 LTTNTSVIDK PKVDTTNRSP NSEFVLLMKA ELDRVNTENE RLRETLNQAN DKYHSLKMHI 120 ISLLHHKQNP NDEAPNKSEH HHKKKIGAES PEKMVEPETD PEKDVDRHKA AEAVMKKARV 180 SVRARSEAQM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDQSVLI 240 TTYEGRHSHP LPPAAMAMAS TTAAAATTLL SGSMTSADGL LMHNSINVPP YYSQNLATIS 300 ASAPFPTITL DLTNNNPASA STAAPQPMFH APFQSHQTQE IMNAATAAAI AADPNFSAAL 360 AAAISSIIGS ARANSDGSDD RISSPESNMR DIGK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-23 | 178 | 254 | 1 | 76 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01737.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848923.1 | 0.0 | PREDICTED: UPF0505 protein C16orf62 homolog isoform X2 | ||||
Swissprot | Q9XEC3 | 5e-83 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A022QHC8 | 0.0 | A0A022QHC8_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01737.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA945 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 4e-62 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01737.1.p |