PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01719.1.p
Common NameLOC105968958, MIMGU_mgv1a013229mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 228aa    MW: 24871.8 Da    PI: 8.4954
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01719.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-203280355
               AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Migut.M01719.1.p 32 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 80
                      8*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.95E-183188No hitNo description
SMARTSM003802.4E-363194IPR001471AP2/ERF domain
PROSITE profilePS5103223.2753188IPR001471AP2/ERF domain
PfamPF008478.0E-133180IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-223289IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.8E-313288IPR001471AP2/ERF domain
PRINTSPR003672.8E-103243IPR001471AP2/ERF domain
PRINTSPR003672.8E-105470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGRGRAPVVK QADAAAHGGE ANGSGILKEI RFRGVRKRPW GRFAAEIRDP WKKTRVWLGT  60
FDSAEDAARA YDAAARSLRG PKAKTNFPFP QNGAVFPDFN PQNPNPPHLK NNHGDPSRFY  120
AQDHQIIAQQ RPTSSGMSST VESFSGPRQQ LPPPPPMQQQ RRYPRSPPVV PDDCHSDCDS  180
SASVVDDTEC DIASSSCKKP LPFDLNMPPP MDAAADVDEL TCTALRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-2031921476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01719.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849126.11e-167PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotQ9SXS81e-55ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A022QFA21e-166A0A022QFA2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.19e-30ethylene responsive element binding factor 3