PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M01478.1.p

Common Name

LOC105968431, MIMGU_mgv1a011022mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

G2-like

Protein Properties

Length: 295aa MW: 31872 Da PI: 6.8637

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M01478.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4e-32	41	95	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerF++av+qLGG+ kAtPk+il++m+vkgLtl h+kSHLQkYRl Migut.M01478.1.p 41 KPRLRWTADLHERFIDAVTQLGGASKATPKAILRTMGVKGLTLFHLKSHLQKYRL 95 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.895	38	98	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.1E-30	38	96	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.3E-24	41	96	IPR006447	Myb domain, plants
SuperFamily	SSF46689	5.55E-16	41	97	IPR009057	Homeodomain-like
Pfam	PF00249	7.5E-8	43	94	IPR001005	SANT/Myb domain
Pfam	PF14379	1.5E-15	135	180	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MFPRLIHPRD AILSQENIQV PNSSGYGQRG DPCLVLTSDP KPRLRWTADL HERFIDAVTQ 60 LGGASKATPK AILRTMGVKG LTLFHLKSHL QKYRLGKQSG KEFEASKDGG YLLDSPGASN 120 SSQNLSASDI NEGYEVKEAL RAQMEVQSKL HLQVEAEKHL QIRQDAERKY MAMLERACKM 180 LADQILGGND DGDCYQGGKA TQAIMPNGPQ NPLLSYASQS ANELGVPPPL EMPPNLRQQL 240 ADCSTESCLT SHGSPVGLPA EGSSPGGKRA ILNVGSTNAS FVWSESDVYN PVCI*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-19	41	97	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-19	41	97	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-19	41	97	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-19	41	97	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269\|PubMed:15634699, ECO:0000269\|PubMed:26586833}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M01478.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269\|PubMed:26586833}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012848514.1	0.0	PREDICTED: myb family transcription factor APL-like
Swissprot	Q8LAJ7	1e-64	PHL3_ARATH; Protein PHR1-LIKE 3
TrEMBL	A0A022QI53	0.0	A0A022QI53_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9764	20	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	5e-67	G2-like family protein

Link Out ? help Back to Top
Phytozome	Migut.M01478.1.p
Entrez Gene	105968431

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Sanz-Fernández M, et al. Screening Arabidopsis mutants in genes useful for phytoremediation. J. Hazard. Mater., 2017. 335: p. 143-151 [PMID:28441590]