PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01461.1.p
Common NameLOC105968731, MIMGU_mgv1a020254mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 326aa    MW: 36884 Da    PI: 5.0455
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01461.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box217.1e-07345440
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                      + C+ +++++  ++C+++   lC +C  + H+       Ht++
  Migut.M01461.1.p  3 QLCDFCGDQRPMIYCRSDAASLCLSCDRNVHSAnalskrHTRT 45
                      57*****************************657888888876 PP
2zf-B_box21.25.9e-074789541
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                       C++++ ++++  C + ++ lC++C  +eH++      H++++
  Migut.M01461.1.p 47 LCERCNCQPATVRCSEEKMSLCQNCDWSEHSSrpstadHKRQT 89
                      7*****************************7799999999876 PP
3CCT65.91.2e-22268311144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       R+ a+lRY+eK+k RkF+KkirY+sRK++A+ R+RvKGrFvk+ 
  Migut.M01461.1.p 268 RDGAVLRYREKKKARKFDKKIRYASRKERADVRKRVKGRFVKAG 311
                       899**************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003361.4E-11147IPR000315B-box-type zinc finger
PROSITE profilePS501199.67147IPR000315B-box-type zinc finger
CDDcd000212.01E-5447No hitNo description
PROSITE profilePS5011910.1964390IPR000315B-box-type zinc finger
CDDcd000211.59E-54790No hitNo description
SMARTSM003360.194890IPR000315B-box-type zinc finger
PROSITE profilePS5101715.438268310IPR010402CCT domain
PfamPF062037.5E-17268310IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MGQLCDFCGD QRPMIYCRSD AASLCLSCDR NVHSANALSK RHTRTLLCER CNCQPATVRC  60
SEEKMSLCQN CDWSEHSSRP STADHKRQTI NSYTGCPTAT EFSRFWSFFS VDRSIHDPEE  120
GSMILEEGKS MKIDFNDALY QELEISDMEL SMEDYDAIFD ESFDGSQQFF ENGGINSLFE  180
IGNSNNDECK PQRLQVPKVS SSKSETADSI TSSDLNVCFP RPAQSTLSVS NGCDIGDYPE  240
CGDFSMVMTD EHPCNSLYPD NQLPSAWRDG AVLRYREKKK ARKFDKKIRY ASRKERADVR  300
KRVKGRFVKA GDPYDYDPLN STVNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01461.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848838.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 10-like
SwissprotQ9LUA91e-100COL10_ARATH; Zinc finger protein CONSTANS-LIKE 10
TrEMBLA0A022QFY90.0A0A022QFY9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12702468
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48250.14e-94B-box type zinc finger protein with CCT domain
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]